PRDM6 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000017318 T089578_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.827 1.000
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000031870 C2H2 ZF 275 296
ENSCJAP00000031870 C2H2 ZF 303 325
ENSCJAP00000031870 C2H2 ZF 331 353
ENSCJAP00000031870 C2H2 ZF 359 380
ENSCJAP00000044308 C2H2 ZF 469 490
ENSCJAP00000044308 C2H2 ZF 497 519
ENSCJAP00000044308 C2H2 ZF 525 547

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRDM6 Anolis carolinensis ENSACAG00000003401 I 0.827
ENSAMEG00000015711 Ailuropoda melanoleuca ENSAMEG00000015711 I 0.827
ENSAMXG00000012588 Astyanax mexicanus ENSAMXG00000012588 I 0.827
PRDM6 Bos taurus ENSBTAG00000020578 I 0.827
PRDM6 Canis familiaris ENSCAFG00000023666 I 0.827
PRDM6 Choloepus hoffmanni ENSCHOG00000003085 I 0.827
ENSCPOG00000004258 Cavia porcellus ENSCPOG00000004258 I 0.827
ENSCSAG00000014599 Chlorocebus sabaeus ENSCSAG00000014599 I 0.827
PRDM6 Dasypus novemcinctus ENSDNOG00000006337 I 0.827
PRDM6 Equus caballus ENSECAG00000004532 I 0.827
PRDM6 Erinaceus europaeus ENSEEUG00000005543 I 0.827
ENSFALG00000007522 Ficedula albicollis ENSFALG00000007522 I 0.827
PRDM6 Felis catus ENSFCAG00000026249 I 0.827
PRDM6 Homo sapiens ENSG00000061455 D 0.827
PRDM6 Gallus gallus ENSGALG00000005351 I 0.827
ENSLACG00000003287 Latimeria chalumnae ENSLACG00000003287 N 0.827
PRDM6 Loxodonta africana ENSLAFG00000000396 I 0.827
ENSLOCG00000008663 Lepisosteus oculatus ENSLOCG00000008663 I 0.827
ENSMEUG00000011470 Macropus eugenii ENSMEUG00000011470 I 0.827
ENSMICG00000007754 Microcebus murinus ENSMICG00000007754 I 0.827
PRDM6 Myotis lucifugus ENSMLUG00000010064 I 0.827
ENSMMUG00000010652 Macaca mulatta ENSMMUG00000010652 I 0.827
PRDM6 Monodelphis domestica ENSMODG00000013415 I 0.827
ENSMPUG00000012965 Mustela putorius furo ENSMPUG00000012965 I 0.827
Prdm6 Mus musculus ENSMUSG00000069378 I 0.827
ENSNLEG00000012064 Nomascus leucogenys ENSNLEG00000012064 I 0.827
ENSOANG00000001527 Ornithorhynchus anatinus ENSOANG00000001527 I 0.827
ENSOARG00000018873 Ovis aries ENSOARG00000018873 I 0.827
PRDM6 Oryctolagus cuniculus ENSOCUG00000003454 I 0.827
PRDM6 Ochotona princeps ENSOPRG00000004020 I 0.827
ENSPANG00000020936 Papio anubis ENSPANG00000020936 I 0.827
PRDM6 Procavia capensis ENSPCAG00000007467 N 0.827
ENSPSIG00000007714 Pelodiscus sinensis ENSPSIG00000007714 I 0.827
PRDM6 Pan troglodytes ENSPTRG00000017180 I 0.827
PRDM6 Pteropus vampyrus ENSPVAG00000006781 I 0.827
Prdm6 Rattus norvegicus ENSRNOG00000030486 I 0.827
ENSSHAG00000009542 Sarcophilus harrisii ENSSHAG00000009542 I 0.827
PRDM6 Sus scrofa ENSSSCG00000014238 I 0.827
PRDM6 Tupaia belangeri ENSTBEG00000010088 I 0.827
PRDM6 Taeniopygia guttata ENSTGUG00000001115 N 0.827
ENSTSYG00000009407 Tarsius syrichta ENSTSYG00000009407 I 0.827
PRDM6 Tursiops truncatus ENSTTRG00000006808 I 0.827
Aan_R002291 Calypte anna Aan_R002291 N 0.827
Afo_R013833 Aptenodytes forsteri Afo_R013833 N 0.827
Alligator_sinensis_CCG004791.1 Alligator sinensis Alligator_sinensis_CCG004791.1 I 0.827
Cmyd_10008583 Chelonia mydas Cmyd_10008583 N 0.827
ENSBTAP00000027421-D1 Bos grunniens ENSBTAP00000027421-D1 I 0.827
ENSP00000261364 Macaca fascicularis ENSP00000261364 I 0.827
Gfo_R011707 Geospiza fortis Gfo_R011707 N 0.827
Myotis_brandtii_PRDM6_10015768 Myotis brandtii Myotis_brandtii_PRDM6_10015768 I 0.827
Ogr18847 Ophisaurus gracilis Ogr18847 I 0.827
Pvit_11059 Pogona vitticeps Pvit_11059 I 0.827
Tal_R005602 Tyto alba Tal_R005602 N 0.827
prdm6 Xenopus tropicalis XB-GENE-854907 I 0.827
ENSPFOG00000000918 Poecilia formosa ENSPFOG00000000918 I 0.821
ENSONIG00000013818 Oreochromis niloticus ENSONIG00000013818 I 0.818
ENSORLG00000017089 Oryzias latipes ENSORLG00000017089 I 0.818
ENSTNIG00000004450 Tetraodon nigroviridis ENSTNIG00000004450 I 0.762
PRDM6 Takifugu rubripes ENSTRUG00000011582 I 0.762