hic1l (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000013139 T112408_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIC2
M02902_2.00 		Homo sapiens
RTGCCMVNN
NNBKGGCAY		 SELEX
Jolma et al.(2013)
HIC2_1 		0.819 0.948
Hic1
M00141_2.00 		Mus musculus
RTGCCMNBN
NVNKGGCAY		 PBM
Badis et al.(2009)
Hic1_2816 		0.789 0.852
Hic1
M02933_2.00 		Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY		 SELEX
Jolma et al.(2013)
Hic1_1 		0.789 0.852
Hic1
M02934_2.00 		Mus musculus
RTGCCAVCN
NGBTGGCAY		 SELEX
Jolma et al.(2013)
Hic1_2 		0.789 0.852
Hic1
M09003_2.00 		Mus musculus
KGGCAMCCH
DGGKTGCCM		 Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C 		0.789 0.852
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000033426 C2H2 ZF 310 332
ENSTRUP00000033426 C2H2 ZF 368 390
ENSTRUP00000033426 C2H2 ZF 396 418
ENSTRUP00000033426 C2H2 ZF 424 446
ENSTRUP00000033426 C2H2 ZF 452 474
ENSTRUP00000033427 C2H2 ZF 420 442
ENSTRUP00000033427 C2H2 ZF 484 506
ENSTRUP00000033427 C2H2 ZF 512 534
ENSTRUP00000033427 C2H2 ZF 540 562
ENSTRUP00000033427 C2H2 ZF 568 590
ENSTRUP00000033428 C2H2 ZF 417 439
ENSTRUP00000033428 C2H2 ZF 481 503
ENSTRUP00000033428 C2H2 ZF 509 531
ENSTRUP00000033428 C2H2 ZF 537 559
ENSTRUP00000033428 C2H2 ZF 565 587

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HIC2 Homo sapiens ENSG00000169635 D 0.819
Hic1 Mus musculus ENSMUSG00000043099 D 0.789
Hic2 Rattus norvegicus ENSRNOG00000051458 I 0.819
ENSXMAG00000020311 Xiphophorus maculatus ENSXMAG00000020311 I 0.827
hic1 Takifugu rubripes ENSTRUG00000004590 I 0.793
HIC2 Taeniopygia guttata ENSTGUG00000008699 I 0.821
HIC1 Taeniopygia guttata ENSTGUG00000005835 I 0.789
ENSSTOG00000006360 Ictidomys tridecemlineatus ENSSTOG00000006360 I 0.819
ENSSSCG00000021196 Sus scrofa ENSSSCG00000021196 I 0.819
Aan_R003503 Calypte anna Aan_R003503 I 0.789
HIC2 Pteropus vampyrus ENSPVAG00000000111 I 0.819
HIC2 Pan troglodytes ENSPTRG00000014112 I 0.819
ENSPSIG00000007902 Pelodiscus sinensis ENSPSIG00000007902 I 0.789
ENSPSIG00000000992 Pelodiscus sinensis ENSPSIG00000000992 I 0.819
ENSPSIG00000000839 Pelodiscus sinensis ENSPSIG00000000839 I 0.819
ENSPPYG00000012022 Pongo abelii ENSPPYG00000012022 I 0.819
ENSPFOG00000020465 Poecilia formosa ENSPFOG00000020465 I 0.827
ENSPANG00000024301 Papio anubis ENSPANG00000024301 I 0.819
Aan_R008211 Calypte anna Aan_R008211 I 0.821
Afo_R001109 Aptenodytes forsteri Afo_R001109 I 0.821
Afo_R013473 Aptenodytes forsteri Afo_R013473 I 0.789
Alligator_sinensis_CCG008952.1 Alligator sinensis Alligator_sinensis_CCG008952.1 I 0.789
Alligator_sinensis_CCG015471.1 Alligator sinensis Alligator_sinensis_CCG015471.1 I 0.821
Brh_R005582 Buceros rhinoceros Brh_R005582 I 0.821
Cmyd_10017824 Chelonia mydas Cmyd_10017824 I 0.821
ENSP00000384889 Macaca fascicularis ENSP00000384889 I 0.819
Gfo_R010813 Geospiza fortis Gfo_R010813 I 0.821
Myotis_brandtii_HIC2_10021802 Myotis brandtii Myotis_brandtii_HIC2_10021802 I 0.819
Ogr08090 Ophisaurus gracilis Ogr08090 I 0.817
Pvit_18806 Pogona vitticeps Pvit_18806 I 0.817
Tal_R003180 Tyto alba Tal_R003180 I 0.821
hic2 Xenopus tropicalis XB-GENE-960044 I 0.820
XP_002937184 Xenopus tropicalis XP_002937184 I 0.791
ENSGALG00000026718 Gallus gallus ENSGALG00000026718 I 0.789
ENSAPLG00000002158 Anas platyrhynchos ENSAPLG00000002158 I 0.821
HIC2 Bos taurus ENSBTAG00000005951 I 0.803
HIC2 Canis familiaris ENSCAFG00000032493 I 0.819
HIC2 Cavia porcellus ENSCPOG00000001134 I 0.819
HIC1 Cavia porcellus ENSCPOG00000020382 I 0.789
ENSCSAG00000013356 Chlorocebus sabaeus ENSCSAG00000013356 I 0.819
hic2 Danio rerio ENSDARG00000100497 I 0.768
HIC2 Dasypus novemcinctus ENSDNOG00000003162 I 0.819
HIC2 Equus caballus ENSECAG00000017997 I 0.819
ENSFALG00000006543 Ficedula albicollis ENSFALG00000006543 I 0.789
ENSFALG00000014495 Ficedula albicollis ENSFALG00000014495 I 0.821
HIC2 Felis catus ENSFCAG00000023903 I 0.819
hic1l Gasterosteus aculeatus ENSGACG00000004268 I 0.827
hic1 Gasterosteus aculeatus ENSGACG00000010848 I 0.793
ENSGALG00000001403 Gallus gallus ENSGALG00000001403 I 0.821
HIC2 Procavia capensis ENSPCAG00000015907 I 0.819
HIC2 Gorilla gorilla ENSGGOG00000006041 I 0.819
ENSLACG00000007028 Latimeria chalumnae ENSLACG00000007028 I 0.789
ENSLOCG00000002169 Lepisosteus oculatus ENSLOCG00000002169 I 0.821
HIC2 Meleagris gallopavo ENSMGAG00000000949 I 0.821
ENSMGAG00000005397 Meleagris gallopavo ENSMGAG00000005397 I 0.789
HIC2 Microcebus murinus ENSMICG00000005154 I 0.817
HIC2 Myotis lucifugus ENSMLUG00000009669 I 0.819
ENSMPUG00000003198 Mustela putorius furo ENSMPUG00000003198 I 0.819
Hic2 Mus musculus ENSMUSG00000050240 I 0.819
HIC2 Oryctolagus cuniculus ENSOCUG00000010516 I 0.819
HIC2 Otolemur garnettii ENSOGAG00000030274 I 0.819
ENSONIG00000014335 Oreochromis niloticus ENSONIG00000014335 I 0.827
hic1 Oryzias latipes ENSORLG00000004895 I 0.793
ENSAMXG00000024918 Astyanax mexicanus ENSAMXG00000024918 I 0.770