ENSXMAG00000004738 (Xiphophorus maculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSXMAG00000004738 T113769_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF6
M04400_2.00 		Homo sapiens
NVMCACRCCCH
DGGGYGTGKBN		 SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX 		0.824 0.985
KLF6
M08857_2.00 		Homo sapiens
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV		 Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A 		0.824 0.985
Klf6
M08962_2.00 		Mus musculus
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV		 Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B 		0.824 0.985
KLF6
M10113_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CPBP_Q6 		0.824 0.985
KLF6
M04401_2.00 		Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN		 SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX 		0.824 0.985
Klf7
M00134_2.00 		Mus musculus
NHHMCRCCCH
DGGGYGKDDN		 PBM
Badis et al.(2009)
Klf7_0974 		0.808 0.956
KLF7
M08298_2.00 		Homo sapiens
VVCHMCGCCCH
DGGGCGKDGBB		 ChIP-seq
Schmitges et al.(2016)
O75840.MEME 		0.808 0.956
Klf12
M00787_2.00 		Mus musculus
NNHMCRCCCH
DGGGYGKDNN		 PBM
Weirauch et al.(2013)
pTH0977 		0.790 0.809
Klf12
M02937_2.00 		Mus musculus
GRCCACGCCCWHHHN
NDDDWGGGCGTGGYC		 SELEX
Jolma et al.(2013)
Klf12_1 		0.790 0.809
KLF12
M04430_2.00 		Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH		 SELEX
Yin et al.(2017)
KLF12_FL_HT-SELEX 		0.790 0.809
KLF12
M08299_2.00 		Homo sapiens
SBNVGCCMCGCCCHB
VDGGGCGKGGCBNVS		 ChIP-seq
Schmitges et al.(2016)
Q9Y4X4.MEME 		0.790 0.809
KLF12
M08879_2.00 		Homo sapiens
GCCCCGCCCYB
VRGGGCGGGGC		 Misc
Kulakovskiy et al.(2013)
KLF12_HUMAN.H11MO.0.C 		0.790 0.809
KLF12
M10186_2.00 		Homo sapiens
HMYACDG
CHGTRKD		 Transfac
Matys et al.(2006)
V$AP2REP_01 		0.790 0.809
KLF12
M04431_2.00 		Homo sapiens
RGSCGACGCCCN
NGGGCGTCGSCY		 SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_1 		0.790 0.809
KLF12
M04432_2.00 		Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN		 SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_2 		0.790 0.809
luna
M03704_2.00 		Drosophila melanogaster
RCCACRCCCH
DGGGYGTGGY		 SELEX
Nitta et al.(2015)
luna_1 		0.784 0.897
luna
M06163_2.00 		Drosophila melanogaster
RRMHMCRCCC
GGGYGKDKYY		 B1H
Zhu et al.(2011)
luna_SANGER_5_FBgn0040765 		0.784 0.897
luna
M06164_2.00 		Drosophila melanogaster
DRCCMCGCCCHNNN
NNNDGGGCGKGGYH		 B1H
Zhu et al.(2011)
luna_SOLEXA_5_FBgn0040765 		0.784 0.897
KLF3
M04418_2.00 		Homo sapiens
RRCCRCGCCCH
DGGGCGYGGYY		 SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX 		0.781 0.824
KLF3
M08876_2.00 		Homo sapiens
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN		 Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B 		0.781 0.824
Klf3
M08982_2.00 		Mus musculus
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN		 Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A 		0.781 0.824
KLF3
M10172_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF3_Q3_01 		0.781 0.824
KLF3
M10173_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF3_Q3 		0.781 0.824
KLF3
M04419_2.00 		Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH		 SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1 		0.781 0.824
KLF3
M04420_2.00 		Homo sapiens
RRSCGCARCCCN
NGGGYTGCGSYY		 SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2 		0.781 0.824
dar1
M06171_2.00 		Drosophila melanogaster
RMCACACCCWH
DWGGGTGTGKY		 B1H
Zhu et al.(2011)
CG12029_SANGER_10_FBgn0035454 		0.771 0.809
dar1
M06172_2.00 		Drosophila melanogaster
NNNRCCACRCCCHNN
NNDGGGYGTGGYNNN		 B1H
Zhu et al.(2011)
CG12029_SOLEXA_5_FBgn0035454 		0.771 0.809
Klf1
M08099_2.00 		Mus musculus
NRCCACACCCW
WGGGTGTGGYN		 ChIP-seq
Mathelier et al.(2014)
MA0493.1 		0.768 0.809
Klf1
M09008_2.00 		Mus musculus
MVMNSCCMCRCCCH
DGGGYGKGGSNKBK		 Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A 		0.768 0.809
Klf1
M09516_2.00 		Mus musculus
DRCCACACCCWN
NWGGGTGTGGYH		 Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478 		0.768 0.809
KLF5
M04410_2.00 		Homo sapiens
NMCACRCCCH
DGGGYGTGKN		 SELEX
Yin et al.(2017)
KLF5_eDBD_HT-SELEX 		0.765 0.809
KLF5
M08086_2.00 		Homo sapiens
BCCMCDCCCH
DGGGHGKGGV		 ChIP-seq
Mathelier et al.(2014)
MA0599.1 		0.765 0.809
KLF5
M08868_2.00 		Homo sapiens
NHVNRCCMCDCCCH
DGGGHGKGGYNBDN		 Misc
Kulakovskiy et al.(2013)
KLF5_HUMAN.H11MO.0.A 		0.765 0.809
Klf5
M08965_2.00 		Mus musculus
KCCMCDCCCHBBBCH
DGVVVDGGGHGKGGM		 Misc
Kulakovskiy et al.(2013)
KLF5_MOUSE.H11MO.0.A 		0.765 0.809
KLF5
M09502_2.00 		Homo sapiens
GCCMCRCCCH
DGGGYGKGGC		 Misc
Heinz et al.(2010)
LoVo-KLF5_GSE49402 		0.765 0.809
KLF5
M10149_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BTEB2_Q3_01 		0.765 0.809
KLF5
M10150_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BTEB2_Q3 		0.765 0.809
KLF5
M04411_2.00 		Homo sapiens
NMCACRCCYH
DRGGYGTGKN		 SELEX
Yin et al.(2017)
KLF5_eDBD_Methyl-HT-SELEX 		0.765 0.809
KLF1
M00226_2.00 		Homo sapiens
CMCGCCCM
KGGGCGKG		 PBM
Barrera et al.(2016)
KLF1_REF 		0.765 0.794
KLF2
M04455_2.00 		Homo sapiens
NVCCMCRCCCH
DGGGYGKGGBN		 SELEX
Yin et al.(2017)
KLF2_eDBD_HT-SELEX 		0.765 0.794
KLF4
M04463_2.00 		Homo sapiens
NVCCACRCCCH
DGGGYGTGGBN		 SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX 		0.765 0.794
KLF4
M08091_2.00 		Homo sapiens
MCACACCCWNN
NNWGGGTGTGK		 ChIP-seq
Mathelier et al.(2014)
MA0039.3 		0.765 0.794
Klf4
M08021_2.00 		Mus musculus
VRCCMCRCCCH
DGGGYGKGGYB		 ChIP-seq
Chen et al.(2011)
SRP000217_Klf4 		0.765 0.794
KLF4
M08243_2.00 		Homo sapiens
RCCMCRCCCH
DGGGYGKGGY		 ChIP-seq
Najafabadi et al.(2015b)
KLF14 		0.765 0.794
KLF1
M08293_2.00 		Homo sapiens
NVNNNRCCMCRCCCH
DGGGYGKGGYNNNBN		 ChIP-seq
Schmitges et al.(2016)
Q13351.MEME 		0.765 0.794
KLF1
M08871_2.00 		Homo sapiens
SVNDGCCMCRCCCH
DGGGYGKGGCHNBS		 Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A 		0.765 0.794
KLF4
M08894_2.00 		Homo sapiens
RCCMCRCCCH
DGGGYGKGGY		 Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A 		0.765 0.794
Klf4
M08964_2.00 		Mus musculus
GCCMCRCCCWBYBBN
NVVRVWGGGYGKGGC		 Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A 		0.765 0.794
KLF1
M10163_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EKLF_Q5_01 		0.765 0.794
KLF1
M10164_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EKLF_Q5 		0.765 0.794
KLF4
M10217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_02 		0.765 0.794
KLF4
M10218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_Q3_01 		0.765 0.794
KLF4
M10219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_Q3 		0.765 0.794
KLF4
M10220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_Q4 		0.765 0.794
KLF2
M10210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LKLF_Q3 		0.765 0.794
KLF2
M10211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LKLF_Q6 		0.765 0.794
KLF2
M04456_2.00 		Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN		 SELEX
Yin et al.(2017)
KLF2_eDBD_Methyl-HT-SELEX 		0.765 0.794
KLF4
M04464_2.00 		Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN		 SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX 		0.765 0.794
KLF1
M00224_2.00 		Homo sapiens
YMCGCCCH
DGGGCGKR		 PBM
Barrera et al.(2016)
KLF1_H299Y 		0.765 0.779
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000004749 C2H2 ZF 211 234
ENSXMAP00000004749 C2H2 ZF 241 265
ENSXMAP00000004749 C2H2 ZF 271 293

Links

Other C2H2 ZF family TFs
Other Xiphophorus maculatus TFs

698 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WT1 Homo sapiens ENSG00000184937 D
Wt1 Mus musculus ENSMUSG00000016458 D
ENSPPYG00000029822 Pongo abelii ENSPPYG00000029822 I
WT1 Taeniopygia guttata ENSTGUG00000004906 I
ENSSTOG00000023716 Ictidomys tridecemlineatus ENSSTOG00000023716 I
WT1 Sus scrofa ENSSSCG00000013316 I
ENSSHAG00000017390 Sarcophilus harrisii ENSSHAG00000017390 I
ENSSARG00000000207 Sorex araneus ENSSARG00000000207 I
Wt1 Rattus norvegicus ENSRNOG00000013074 I
WT1 Pan troglodytes ENSPTRG00000003476 I
ENSPSIG00000013679 Pelodiscus sinensis ENSPSIG00000013679 I
wt1b Tetraodon nigroviridis ENSTNIG00000013806 I
ENSPMAG00000008950 Petromyzon marinus ENSPMAG00000008950 I
ENSPFOG00000010572 Poecilia formosa ENSPFOG00000010572 I
WT1 Procavia capensis ENSPCAG00000002213 I
ENSPANG00000019482 Papio anubis ENSPANG00000019482 I
wt1 Oryzias latipes ENSORLG00000012424 I
wt1 Oryzias latipes ENSORLG00000009859 I
ENSOPRG00000015709 Ochotona princeps ENSOPRG00000015709 I
ENSONIG00000011043 Oreochromis niloticus ENSONIG00000011043 I
Gfo_R001970 Geospiza fortis Gfo_R001970 I
wt1.S Xenopus laevis XB-GENE-864792 I
wt1.L Xenopus laevis XB-GENE-6252376 I
wt1 Xenopus tropicalis XB-GENE-484999 I
B7ZSG3 Xenopus laevis B7ZSG3 I
B5DE03 Xenopus tropicalis B5DE03 I
fgenesh2_pm.scaffold_110000013 Branchiostoma floridae fgenesh2_pm.scaffold_110000013 I
fgenesh2_pg.scaffold_80000039 Branchiostoma floridae fgenesh2_pg.scaffold_80000039 I
Pvit_09510 Pogona vitticeps Pvit_09510 I
WT1 Otolemur garnettii ENSOGAG00000007118 I
ENSP00000331327 Macaca fascicularis ENSP00000331327 I
ENSP00000331327-D1 Bos grunniens ENSP00000331327-D1 I
Alligator_sinensis_CCG012951.1 Alligator sinensis Alligator_sinensis_CCG012951.1 I
Afo_R014628 Aptenodytes forsteri Afo_R014628 I
Aan_R006616 Calypte anna Aan_R006616 I
ENSXMAG00000005139 Xiphophorus maculatus ENSXMAG00000005139 I
ENSVPAG00000007788 Vicugna pacos ENSVPAG00000007788 I
wt1b Takifugu rubripes ENSTRUG00000006559 I
wt1a Danio rerio ENSDARG00000031420 I
wt1b Gasterosteus aculeatus ENSGACG00000016020 I
WT1 Felis catus ENSFCAG00000000308 I
ENSFALG00000010820 Ficedula albicollis ENSFALG00000010820 I
WT1 Echinops telfairi ENSETEG00000000684 I
ENSEEUG00000007221 Erinaceus europaeus ENSEEUG00000007221 I
ENSECAG00000022308 Equus caballus ENSECAG00000022308 I
Wt1 Dipodomys ordii ENSDORG00000013725 I
WT1 Dasypus novemcinctus ENSDNOG00000003652 I
WT1 Gallus gallus ENSGALG00000012115 I
wt1b Danio rerio ENSDARG00000007990 I
WT1 Callithrix jacchus ENSCJAG00000005900 I
WT1 Choloepus hoffmanni ENSCHOG00000006244 I
WT1 Canis familiaris ENSCAFG00000007426 I
WT1 Bos taurus ENSBTAG00000047268 I
ENSAPLG00000005775 Anas platyrhynchos ENSAPLG00000005775 I
ENSAMXG00000013017 Astyanax mexicanus ENSAMXG00000013017 I
ENSAMEG00000006957 Ailuropoda melanoleuca ENSAMEG00000006957 I
WT1 Myotis lucifugus ENSMLUG00000027523 I
ENSACAG00000002480 Anolis carolinensis ENSACAG00000002480 I
WT1 Oryctolagus cuniculus ENSOCUG00000005882 I
ENSOARG00000016334 Ovis aries ENSOARG00000016334 I
ENSOANG00000015147 Ornithorhynchus anatinus ENSOANG00000015147 I
ENSNLEG00000017890 Nomascus leucogenys ENSNLEG00000017890 I
ENSMPUG00000011307 Mustela putorius furo ENSMPUG00000011307 I
WT1 Monodelphis domestica ENSMODG00000009646 I
WT1 Macaca mulatta ENSMMUG00000009881 I
ENSONIG00000005545 Oreochromis niloticus ENSONIG00000005545 I
WT1 Microcebus murinus ENSMICG00000004097 I
ENSMGAG00000001489 Meleagris gallopavo ENSMGAG00000001489 I
ENSLOCG00000004537 Lepisosteus oculatus ENSLOCG00000004537 I
WT1 Loxodonta africana ENSLAFG00000006160 I
ENSLACG00000016378 Latimeria chalumnae ENSLACG00000016378 I
ENSGMOG00000012296 Gadus morhua ENSGMOG00000012296 I
WT1 Gorilla gorilla ENSGGOG00000011586 I