CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSXMAG00000013916
(
Xiphophorus maculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSXMAG00000013916
T113939_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000013945
C2H2 ZF
317
341
HSCHIPGCGKVYGKTSHLKAHLRWH
ENSXMAP00000013945
C2H2 ZF
347
371
FVCNWLFCGKRFTRSDELQRHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Xiphophorus maculatus
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00008p00265010
Amborella trichopoda
AMTR_s00008p00265010
N
AMTR_s00071p00111940
Amborella trichopoda
AMTR_s00071p00111940
N
HEC2
Arabidopsis thaliana
AT3G50330
N
IND
Arabidopsis thaliana
AT4G00120
N
HEC3
Arabidopsis thaliana
AT5G09750
N
HEC1
Arabidopsis thaliana
AT5G67060
N
BGIOSGA000939
Oryza indica
BGIOSGA000939
N
BGIOSGA001389
Oryza indica
BGIOSGA001389
N
BGIOSGA022533
Oryza indica
BGIOSGA022533
N
BGIOSGA026828
Oryza indica
BGIOSGA026828
N
BGIOSGA027780
Oryza indica
BGIOSGA027780
N
BGIOSGA030896
Oryza indica
BGIOSGA030896
N
Bo1g084640
Brassica oleracea
Bo1g084640
N
Bo2g009510
Brassica oleracea
Bo2g009510
N
Bo2g167880
Brassica oleracea
Bo2g167880
N
Bo3g054830
Brassica oleracea
Bo3g054830
N
Bo7g064100
Brassica oleracea
Bo7g064100
N
Bo8g079710
Brassica oleracea
Bo8g079710
N
Bo9g020420
Brassica oleracea
Bo9g020420
N
Bo9g173860
Brassica oleracea
Bo9g173860
N
Bra000979
Brassica rapa
Bra000979
N
Bra012128
Brassica rapa
Bra012128
N
Bra028620
Brassica rapa
Bra028620
N
Bra030002
Brassica rapa
Bra030002
N
Bra036071
Brassica rapa
Bra036071
N
Bra036801
Brassica rapa
Bra036801
N
Bra037128
Brassica rapa
Bra037128
N
BRADI1G46100
Brachypodium distachyon
BRADI1G46100
N
BRADI2G41390
Brachypodium distachyon
BRADI2G41390
N
BRADI3G13300
Brachypodium distachyon
BRADI3G13300
N
BRADI3G38250
Brachypodium distachyon
BRADI3G38250
N
BRADI4G32060
Brachypodium distachyon
BRADI4G32060
N
F775_04427
Aegilops tauschii
F775_04427
N
F775_52433
Aegilops tauschii
F775_52433
N
HEC2
Arabidopsis lyrata
fgenesh2_kg.5__1376__AT3G50330.1
N
IND1
Arabidopsis lyrata
fgenesh2_kg.6__3690__AT4G00120.1
N
HEC3
Arabidopsis lyrata
fgenesh2_kg.6__929__AT5G09750.1
N
HEC1
Arabidopsis lyrata
fgenesh2_kg.8__2711__AT5G67060.1
N
GLYMA01G39360
Glycine max
GLYMA01G39360
N
GLYMA04G04190
Glycine max
GLYMA04G04190
N
GLYMA04G39210
Glycine max
GLYMA04G39210
N
GLYMA05G19920
Glycine max
GLYMA05G19920
N
GLYMA05G32410
Glycine max
GLYMA05G32410
N
GLYMA06G04380
Glycine max
GLYMA06G04380
N
GLYMA06G15730
Glycine max
GLYMA06G15730
N
GLYMA08G16570
Glycine max
GLYMA08G16570
N
GLYMA11G05920
Glycine max
GLYMA11G05920
N
GLYMA17G19830
Glycine max
GLYMA17G19830
N
GRMZM2G081816
Zea mays
GRMZM2G081816
N
GRMZM2G111666
Zea mays
GRMZM2G111666
N
GRMZM2G134735
Zea mays
GRMZM2G134735
N
GRMZM2G354618
Zea mays
GRMZM2G354618
N
GRMZM2G414252
Zea mays
GRMZM2G414252
N
GRMZM2G471635
Zea mays
GRMZM2G471635
N
GRMZM5G812883
Zea mays
GRMZM5G812883
N
GRMZM5G817854
Zea mays
GRMZM5G817854
N
GRMZM5G818776
Zea mays
GRMZM5G818776
N
GSMUA_Achr10G25590_001
Musa acuminata
GSMUA_Achr10G25590_001
N
GSMUA_Achr5G01290_001
Musa acuminata
GSMUA_Achr5G01290_001
N
GSMUA_Achr6G18580_001
Musa acuminata
GSMUA_Achr6G18580_001
N
GSMUA_Achr8G24970_001
Musa acuminata
GSMUA_Achr8G24970_001
N
GSMUA_Achr9G15380_001
Musa acuminata
GSMUA_Achr9G15380_001
N
GSMUA_Achr9G29130_001
Musa acuminata
GSMUA_Achr9G29130_001
N
LPERR01G17090
Leersia perrieri
LPERR01G17090
N
LPERR01G24260
Leersia perrieri
LPERR01G24260
N
LPERR06G06410
Leersia perrieri
LPERR06G06410
N
LPERR08G01030
Leersia perrieri
LPERR08G01030
N
LPERR08G14680
Leersia perrieri
LPERR08G14680
N
LPERR09G09120
Leersia perrieri
LPERR09G09120
N
MLOC_16429
Hordeum vulgare
MLOC_16429
N
MLOC_4332
Hordeum vulgare
MLOC_4332
N
MTR_3g101810
Medicago truncatula
MTR_3g101810
N
MTR_5g017210
Medicago truncatula
MTR_5g017210
N
MTR_8g093500
Medicago truncatula
MTR_8g093500
N
OB01G37310
Oryza brachyantha
OB01G37310
N
OB08G10720
Oryza brachyantha
OB08G10720
N
OBART01G19850
Oryza barthii
OBART01G19850
N
OBART01G28250
Oryza barthii
OBART01G28250
N
OGLUM01G23470
Oryza glumaepatula
OGLUM01G23470
N
OGLUM01G32180
Oryza glumaepatula
OGLUM01G32180
N
OGLUM06G07430
Oryza glumaepatula
OGLUM06G07430
N
OGLUM08G00660
Oryza glumaepatula
OGLUM08G00660
N
OGLUM08G18600
Oryza glumaepatula
OGLUM08G18600
N
OGLUM09G13100
Oryza glumaepatula
OGLUM09G13100
N
OLONG_008667
Oryza longistaminata
OLONG_008667
N
OMERI01G18460
Oryza meridionalis
OMERI01G18460
N
OMERI05G07470
Oryza meridionalis
OMERI05G07470
N
OMERI06G08170
Oryza meridionalis
OMERI06G08170
N
OMERI08G00980
Oryza meridionalis
OMERI08G00980
N
OMERI09G10060
Oryza meridionalis
OMERI09G10060
N
ONIVA01G07440
Oryza nivara
ONIVA01G07440
N
ONIVA01G32170
Oryza nivara
ONIVA01G32170
N
ONIVA03G20840
Oryza nivara
ONIVA03G20840
N
ONIVA08G00590
Oryza nivara
ONIVA08G00590
N
ONIVA08G19790
Oryza nivara
ONIVA08G19790
N
OPUNC01G20250
Oryza punctata
OPUNC01G20250
N
OPUNC01G28050
Oryza punctata
OPUNC01G28050
N
OPUNC06G06640
Oryza punctata
OPUNC06G06640
N
OPUNC08G00600
Oryza punctata
OPUNC08G00600
N
OPUNC08G15570
Oryza punctata
OPUNC08G15570
N
OPUNC09G11020
Oryza punctata
OPUNC09G11020
N
ORGLA01G0163600
Oryza glaberrima
ORGLA01G0163600
N
ORGLA01G0233600
Oryza glaberrima
ORGLA01G0233600
N
ORGLA08G0155700
Oryza glaberrima
ORGLA08G0155700
N
ORGLA08G0237200
Oryza glaberrima
ORGLA08G0237200
N
ORGLA09G0096500
Oryza glaberrima
ORGLA09G0096500
N
ORUFI01G31350
Oryza rufipogon
ORUFI01G31350
N
ORUFI06G07280
Oryza rufipogon
ORUFI06G07280
N
ORUFI08G00650
Oryza rufipogon
ORUFI08G00650
N
ORUFI08G19930
Oryza rufipogon
ORUFI08G19930
N
ORUFI09G13650
Oryza rufipogon
ORUFI09G13650
N
OS01G0566800
Oryza sativa
OS01G0566800
N
OS01G0707500
Oryza sativa
OS01G0707500
N
OS08G0108500
Oryza sativa
OS08G0108500
N
OS09G0455300
Oryza sativa
OS09G0455300
N
PGSC0003DMG400004039
Solanum tuberosum
PGSC0003DMG400004039
N
PGSC0003DMG400007964
Solanum tuberosum
PGSC0003DMG400007964
N
PGSC0003DMG400028657
Solanum tuberosum
PGSC0003DMG400028657
N
POPTR_0002s12660
Populus trichocarpa
POPTR_0002s12660
N
POPTR_0005s06220
Populus trichocarpa
POPTR_0005s06220
N
POPTR_0005s18210
Populus trichocarpa
POPTR_0005s18210
N
XM_002310473.1
Populus trichocarpa
POPTR_0007s03950
N
POPTR_0007s10950
Populus trichocarpa
POPTR_0007s10950
N
POPTR_0014s02720
Populus trichocarpa
POPTR_0014s02720
N
PRUPE_ppa021226mg
Prunus persica
PRUPE_ppa021226mg
N
PRUPE_ppa021410mg
Prunus persica
PRUPE_ppa021410mg
N
PRUPE_ppa022938mg
Prunus persica
PRUPE_ppa022938mg
N
Sb02g026530
Sorghum bicolor
Sb02g026530
N
Sb03g025570
Sorghum bicolor
Sb03g025570
N
Sb03g032520
Sorghum bicolor
Sb03g032520
N
Sb07g000900
Sorghum bicolor
Sb07g000900
N
Sb07g000910
Sorghum bicolor
Sb07g000910
N
Sb07g022920
Sorghum bicolor
Sb07g022920
N
Sb09g027030
Sorghum bicolor
Sb09g027030
N
SELMODRAFT_405220
Selaginella moellendorffii
SELMODRAFT_405220
N
SELMODRAFT_415047
Selaginella moellendorffii
SELMODRAFT_415047
N
Si001743m.g
Setaria italica
Si001743m.g
N
Si003753m.g
Setaria italica
Si003753m.g
N
Si015197m.g
Setaria italica
Si015197m.g
N
Si015349m.g
Setaria italica
Si015349m.g
N
Si030966m.g
Setaria italica
Si030966m.g
N
Solyc02g090950.1
Solanum lycopersicum
Solyc02g090950.1
N
Solyc04g078790.2
Solanum lycopersicum
Solyc04g078790.2
N
Solyc11g005780.1
Solanum lycopersicum
Solyc11g005780.1
N
Solyc12g088790.1
Solanum lycopersicum
Solyc12g088790.1
N
TCM_000632
Theobroma cacao
TCM_000632
N
TCM_001435
Theobroma cacao
TCM_001435
N
TCM_033818
Theobroma cacao
TCM_033818
N
TRAES3BF075800010CFD_g
Triticum aestivum
TRAES3BF075800010CFD_g
N
TRAES3BF276900020CFD_g
Triticum aestivum
TRAES3BF276900020CFD_g
N
Traes_5BL_DDC2491F7
Triticum aestivum
Traes_5BL_DDC2491F7
N
Traes_6AS_C1A37E015
Triticum aestivum
Traes_6AS_C1A37E015
N
Traes_7DL_F43F7A9A3
Triticum aestivum
Traes_7DL_F43F7A9A3
N
TRIUR3_19098
Triticum urartu
TRIUR3_19098
N
TRIUR3_19402
Triticum urartu
TRIUR3_19402
N
TRIUR3_28638
Triticum urartu
TRIUR3_28638
N
HEC3
Vitis vinifera
VIT_04s0044g01040
N
VIT_07s0031g00550
Vitis vinifera
VIT_07s0031g00550
N
VIT_18s0001g10400
Vitis vinifera
VIT_18s0001g10400
N
Ca_01550
Cicer arietinum
Ca_01550
N
Ca_02154
Cicer arietinum
Ca_02154
N
Ca_09282
Cicer arietinum
Ca_09282
N
Ca_09667
Cicer arietinum
Ca_09667
N
Cla008578
Citrullus lanatus
Cla008578
N
Cla015855
Citrullus lanatus
Cla015855
N
Cla020499
Citrullus lanatus
Cla020499
N
Cla020973
Citrullus lanatus
Cla020973
N
Cla022928
Citrullus lanatus
Cla022928
N
Pm001707
Prunus mume
Pm001707
N
Pm005293
Prunus mume
Pm005293
N
Pm026380
Prunus mume
Pm026380
N
30115.m001220
Ricinus communis
30115.m001220
N
30136.m001043
Ricinus communis
30136.m001043
N
30170.m013861
Ricinus communis
30170.m013861
N
cassava15224.m1
Manihot esculenta
cassava15224.m1
N
cassava41909.m1
Manihot esculenta
cassava41909.m1
N
cassava45275.m1
Manihot esculenta
cassava45275.m1
N
cassava5871.m1
Manihot esculenta
cassava5871.m1
N
cassava8495.m1
Manihot esculenta
cassava8495.m1
N
Cucsa.101020
Cucumis sativus
Cucsa.101020
N
Cucsa.352300
Cucumis sativus
Cucsa.352300
N
Cucsa.360770
Cucumis sativus
Cucsa.360770
N
Cucsa.366890
Cucumis sativus
Cucsa.366890
N
Cucsa.396050
Cucumis sativus
Cucsa.396050
N
estExt_fgenesh1_pg.C_550008
Physcomitrella patens
estExt_fgenesh1_pg.C_550008
N
fgenesh1_pg.scaffold_273000011
Physcomitrella patens
fgenesh1_pg.scaffold_273000011
N
gw1.67.189.1
Physcomitrella patens
gw1.67.189.1
N
mg018414m
Mimulus guttatus
mg018414m
N
mgf016799m
Mimulus guttatus
mgf016799m
N
mgf019142m
Mimulus guttatus
mgf019142m
N
Aquca_007_00665
Aquilegia coerulea
Aquca_007_00665
N
Aquca_010_00306
Aquilegia coerulea
Aquca_010_00306
N
Aquca_022_00317
Aquilegia coerulea
Aquca_022_00317
N
Bostr.0568s0128
Boechera stricta
Bostr.0568s0128
N
Bostr.13129s0018
Boechera stricta
Bostr.13129s0018
N
Bostr.14547s0021
Boechera stricta
Bostr.14547s0021
N
Bostr.6864s0212
Boechera stricta
Bostr.6864s0212
N
Cagra.0706s0009
Capsella grandiflora
Cagra.0706s0009
N
Cagra.1085s0086
Capsella grandiflora
Cagra.1085s0086
N
Cagra.1261s0004
Capsella grandiflora
Cagra.1261s0004
N
Cagra.2428s0003
Capsella grandiflora
Cagra.2428s0003
N
Carubv10003163m.g
Capsella rubella
Carubv10003163m.g
N
Carubv10003900m.g
Capsella rubella
Carubv10003900m.g
N
Carubv10019056m.g
Capsella rubella
Carubv10019056m.g
N
Carubv10027898m.g
Capsella rubella
Carubv10027898m.g
N
Ciclev10003815m.g
Citrus clementina
Ciclev10003815m.g
N
Eucgr.F00216
Eucalyptus grandis
Eucgr.F00216
N
Eucgr.H01682
Eucalyptus grandis
Eucgr.H01682
N
Eucgr.H02048
Eucalyptus grandis
Eucgr.H02048
N
Eucgr.H04946
Eucalyptus grandis
Eucgr.H04946
N
evm.TU.supercontig_49.31
Carica papaya
evm.TU.supercontig_49.31
N
evm.TU.supercontig_55.142
Carica papaya
evm.TU.supercontig_55.142
N
gene09115-v1.0-hybrid
Fragaria vesca
gene09115-v1.0-hybrid
N
gene17881-v1.0-hybrid
Fragaria vesca
gene17881-v1.0-hybrid
N
gene23830-v1.0-hybrid
Fragaria vesca
gene23830-v1.0-hybrid
N
Gorai.003G025300
Gossypium raimondii
Gorai.003G025300
N
Gorai.007G213700
Gossypium raimondii
Gorai.007G213700
N
Gorai.009G212900
Gossypium raimondii
Gorai.009G212900
N
Gorai.010G020500
Gossypium raimondii
Gorai.010G020500
N
Gorai.011G116100
Gossypium raimondii
Gorai.011G116100
N
Lus10005710.g
Linum usitatissimum
Lus10005710.g
N
Lus10012670.g
Linum usitatissimum
Lus10012670.g
N
Lus10042647.g
Linum usitatissimum
Lus10042647.g
N
MDP0000123893
Malus domestica
MDP0000123893
N
MDP0000123894
Malus domestica
MDP0000123894
N
MDP0000249405
Malus domestica
MDP0000249405
N
MDP0000420192
Malus domestica
MDP0000420192
N
MDP0000711774
Malus domestica
MDP0000711774
N
orange1.1g024139m.g
Citrus sinensis
orange1.1g024139m.g
N
Pavir.Ba02034
Panicum virgatum
Pavir.Ba02034
N
Pavir.Ca00715
Panicum virgatum
Pavir.Ca00715
N
Pavir.Ea01618
Panicum virgatum
Pavir.Ea01618
N
Pavir.Eb02113
Panicum virgatum
Pavir.Eb02113
N
Pavir.Eb02901
Panicum virgatum
Pavir.Eb02901
N
Pavir.Fa00680
Panicum virgatum
Pavir.Fa00680
N
Pavir.Fa02152
Panicum virgatum
Pavir.Fa02152
N
Pavir.J20328
Panicum virgatum
Pavir.J20328
N
Pavir.J21430
Panicum virgatum
Pavir.J21430
N
Pavir.J21912
Panicum virgatum
Pavir.J21912
N
Pavir.J39499
Panicum virgatum
Pavir.J39499
N
SapurV1A.0167s0080
Salix purpurea
SapurV1A.0167s0080
N
SapurV1A.0352s0020
Salix purpurea
SapurV1A.0352s0020
N
SapurV1A.0423s0010
Salix purpurea
SapurV1A.0423s0010
N
SapurV1A.0550s0030
Salix purpurea
SapurV1A.0550s0030
N
SapurV1A.0623s0130
Salix purpurea
SapurV1A.0623s0130
N
SapurV1A.2123s0040
Salix purpurea
SapurV1A.2123s0040
N
Thhalv10004846m.g
Eutrema salsugineum
Thhalv10004846m.g
N
Thhalv10011068m.g
Eutrema salsugineum
Thhalv10011068m.g
N
Thhalv10015330m.g
Eutrema salsugineum
Thhalv10015330m.g
N
Thhalv10029526m.g
Eutrema salsugineum
Thhalv10029526m.g
N
PK01043.1
Cannabis sativa
PK01043.1
N
LjSGA_011209.1
Lotus japonicus
LjSGA_011209.1
N
LjT10C23.20.nc
Lotus japonicus
LjT10C23.20.nc
N