GA11715 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0071765 T114658_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.825 0.991
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.825 0.991
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.825 0.991
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.788 0.921
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.788 0.921
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.788 0.921
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.788 0.921
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.767 0.807
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.767 0.807
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.767 0.807
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.767 0.807
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.758 0.789
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.758 0.789
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.758 0.789
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0286552 C2H2 ZF 444 466
FBpp0286552 C2H2 ZF 475 497
FBpp0286552 C2H2 ZF 501 523
FBpp0286552 C2H2 ZF 529 551
FBpp0286552 C2H2 ZF 557 578

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Hes1 Mus musculus ENSMUSG00000022528 D
HES1 Homo sapiens ENSG00000114315 D
HES1 Pan troglodytes ENSPTRG00000015753 I
her9 Takifugu rubripes ENSTRUG00000009985 I
her6 Tetraodon nigroviridis ENSTNIG00000015567 I
her9 Tetraodon nigroviridis ENSTNIG00000015161 I
HES4 Taeniopygia guttata ENSTGUG00000009134 I
ENSSTOG00000026531 Ictidomys tridecemlineatus ENSSTOG00000026531 I
ENSSSCG00000026362 Sus scrofa ENSSSCG00000026362 I
ENSSSCG00000024430 Sus scrofa ENSSSCG00000024430 I
Hes1 Rattus norvegicus ENSRNOG00000001720 I
HES1 Pteropus vampyrus ENSPVAG00000015487 I
ENSPTRG00000039445 Pan troglodytes ENSPTRG00000039445 I
ENSPTRG00000023647 Pan troglodytes ENSPTRG00000023647 I
HES1 Tursiops truncatus ENSTTRG00000001687 I
ENSPSIG00000013040 Pelodiscus sinensis ENSPSIG00000013040 I
ENSPPYG00000014419 Pongo abelii ENSPPYG00000014419 I
ENSPFOG00000022586 Poecilia formosa ENSPFOG00000022586 I
ENSPFOG00000019084 Poecilia formosa ENSPFOG00000019084 I
ENSPFOG00000016659 Poecilia formosa ENSPFOG00000016659 I
ENSPANG00000024455 Papio anubis ENSPANG00000024455 I
ENSPANG00000018250 Papio anubis ENSPANG00000018250 I
hes1 Oryzias latipes ENSORLG00000007556 I
hes4 Oryzias latipes ENSORLG00000005453 I
ENSONIG00000010641 Oreochromis niloticus ENSONIG00000010641 I
ENSONIG00000002619 Oreochromis niloticus ENSONIG00000002619 I
estExt_fgenesh2_pg.C_2610041 Branchiostoma floridae estExt_fgenesh2_pg.C_2610041 I
hes1.L Xenopus laevis XB-GENE-865756 I
hes4.L Xenopus laevis XB-GENE-865740 I
hes1.S Xenopus laevis XB-GENE-6256448 I
hes4.S Xenopus laevis XB-GENE-6256031 I
hes1 Xenopus tropicalis XB-GENE-487995 I
hes4 Xenopus tropicalis XB-GENE-487830 I
AAZ04408 Xenopus tropicalis AAZ04408 I
AAY96799 Xenopus tropicalis AAY96799 I
estExt_GenewiseH_1.C_960240 Branchiostoma floridae estExt_GenewiseH_1.C_960240 I
estExt_GenewiseH_1.C_2610051 Branchiostoma floridae estExt_GenewiseH_1.C_2610051 I
estExt_fgenesh2_pg.C_3670032 Branchiostoma floridae estExt_fgenesh2_pg.C_3670032 I
estExt_fgenesh2_pg.C_3520029 Branchiostoma floridae estExt_fgenesh2_pg.C_3520029 I
her6 Takifugu rubripes ENSTRUG00000017395 I
Pvit_14102 Pogona vitticeps Pvit_14102 I
Pvit_06331 Pogona vitticeps Pvit_06331 I
Ogr11517 Ophisaurus gracilis Ogr11517 I
Ogr04559 Ophisaurus gracilis Ogr04559 I
Myotis_brandtii_Hes1_10032756 Myotis brandtii Myotis_brandtii_Hes1_10032756 I
ENSP00000232424 Macaca fascicularis ENSP00000232424 I
ENSBTAP00000000742-D1 Bos grunniens ENSBTAP00000000742-D1 I
Alligator_sinensis_CCG015374.1 Alligator sinensis Alligator_sinensis_CCG015374.1 I
ENSXMAG00000004442 Xiphophorus maculatus ENSXMAG00000004442 I
ENSXMAG00000003794 Xiphophorus maculatus ENSXMAG00000003794 I
HES1 Otolemur garnettii ENSOGAG00000032425 I
HES4 Dasypus novemcinctus ENSDNOG00000024495 I
HES4 Gorilla gorilla ENSGGOG00000013399 I
HES1 Gorilla gorilla ENSGGOG00000008521 I
hairy1 Gallus gallus ENSGALG00000002055 I
ENSGACG00000015969 Gasterosteus aculeatus ENSGACG00000015969 I
her6 Gasterosteus aculeatus ENSGACG00000009264 I
her9 Gasterosteus aculeatus ENSGACG00000007334 I
HES4 Homo sapiens ENSG00000188290 I
ENSFALG00000007228 Ficedula albicollis ENSFALG00000007228 I
HES1 Equus caballus ENSECAG00000026945 I
ENSDORG00000014783 Dipodomys ordii ENSDORG00000014783 I
HES1 Dasypus novemcinctus ENSDNOG00000039639 I
HES1 Anolis carolinensis ENSACAG00000001611 I
her9 Danio rerio ENSDARG00000056438 I
ENSCSAG00000008869 Chlorocebus sabaeus ENSCSAG00000008869 I
ENSCSAG00000000668 Chlorocebus sabaeus ENSCSAG00000000668 I
ENSCPOG00000021042 Cavia porcellus ENSCPOG00000021042 I
HES1 Callithrix jacchus ENSCJAG00000014044 I
HES1 Choloepus hoffmanni ENSCHOG00000005633 I
HES4 Canis familiaris ENSCAFG00000019350 I
HES4 Bos taurus ENSBTAG00000014705 I
HES1 Bos taurus ENSBTAG00000000569 I
ENSAPLG00000008077 Anas platyrhynchos ENSAPLG00000008077 I
ENSAMEG00000015855 Ailuropoda melanoleuca ENSAMEG00000015855 I
ENSGMOG00000015708 Gadus morhua ENSGMOG00000015708 I
ENSONIG00000002398 Oreochromis niloticus ENSONIG00000002398 I
HES1 Oryctolagus cuniculus ENSOCUG00000009363 I
ENSOARG00000020422 Ovis aries ENSOARG00000020422 I
ENSOARG00000007304 Ovis aries ENSOARG00000007304 I
HES1 Ornithorhynchus anatinus ENSOANG00000015683 I
ENSNLEG00000006836 Nomascus leucogenys ENSNLEG00000006836 I
ENSMPUG00000013915 Mustela putorius furo ENSMPUG00000013915 I
ENSMPUG00000003643 Mustela putorius furo ENSMPUG00000003643 I
ENSMODG00000019833 Monodelphis domestica ENSMODG00000019833 I
HES4 Monodelphis domestica ENSMODG00000018647 I
HES4 Macaca mulatta ENSMMUG00000001817 I
HES4 Microcebus murinus ENSMICG00000015660 I
ENSMICG00000012430 Microcebus murinus ENSMICG00000012430 I
HES1 Meleagris gallopavo ENSMGAG00000007566 I
ENSMEUG00000013941 Macropus eugenii ENSMEUG00000013941 I
ENSLOCG00000007298 Lepisosteus oculatus ENSLOCG00000007298 I
ENSLOCG00000004988 Lepisosteus oculatus ENSLOCG00000004988 I
HES1 Loxodonta africana ENSLAFG00000008932 I
ENSLACG00000017918 Latimeria chalumnae ENSLACG00000017918 I
ENSLACG00000009729 Latimeria chalumnae ENSLACG00000009729 I
ENSGMOG00000018048 Gadus morhua ENSGMOG00000018048 I
ENSGMOG00000000092 Gadus morhua ENSGMOG00000000092 I
HES2 Canis familiaris ENSCAFG00000019577 N
ENSAMEG00000009788 Ailuropoda melanoleuca ENSAMEG00000009788 N