CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GE12156
(
Drosophila yakuba
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0229922
T116909_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0257166
C2H2 ZF
324
346
YNCLLCPKSYRKRKSLLDHYKMH
FBpp0257166
C2H2 ZF
378
400
FVCETCGESYSRKQQFHAHVESH
FBpp0257166
C2H2 ZF
408
428
FPCGECGLKFPQKKLQQHFEE
FBpp0257166
C2H2 ZF
437
459
ICEVCGEEFQSKNALYQHIIRVH
FBpp0257166
C2H2 ZF
465
487
FECHICHNRFTLKANLERHVQLH
FBpp0257166
C2H2 ZF
494
517
YVCDLCGSSYFTYPALKEHYSNAH
FBpp0257166
C2H2 ZF
523
545
CKCTLCGKRFGSAKSLQRHLPSH
FBpp0257166
C2H2 ZF
551
574
HCCNYCDQTFKWKTHLVRHKQTMH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila yakuba
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LHY
Arabidopsis thaliana
AT1G01060
D
RVE7
Arabidopsis thaliana
AT1G18330
D
CCA1
Arabidopsis thaliana
AT2G46830
D
RVE7L
Arabidopsis thaliana
AT3G10113
D
RVE1
Arabidopsis thaliana
AT5G17300
D
OS08G0157600
Oryza sativa
OS08G0157600
D
PK08316.1
Cannabis sativa
PK08316.1
D
AMTR_s00001p00272270
Amborella trichopoda
AMTR_s00001p00272270
I
AMTR_s00044p00072910
Amborella trichopoda
AMTR_s00044p00072910
I
RVE2
Arabidopsis thaliana
AT5G37260
I
BGIOSGA002364
Oryza indica
BGIOSGA002364
I
BGIOSGA005828
Oryza indica
BGIOSGA005828
I
BGIOSGA014483
Oryza indica
BGIOSGA014483
I
BGIOSGA020501
Oryza indica
BGIOSGA020501
I
BGIOSGA028019
Oryza indica
BGIOSGA028019
I
Bo2g013560
Brassica oleracea
Bo2g013560
I
Bo3g001090
Brassica oleracea
Bo3g001090
I
Bo3g012470
Brassica oleracea
Bo3g012470
I
Bo4g006930
Brassica oleracea
Bo4g006930
I
Bo5g002760
Brassica oleracea
Bo5g002760
I
Bo5g025310
Brassica oleracea
Bo5g025310
I
Bo6g057640
Brassica oleracea
Bo6g057640
I
Bo9g003580
Brassica oleracea
Bo9g003580
I
Bo9g161410
Brassica oleracea
Bo9g161410
I
Bra004503
Brassica rapa
Bra004503
I
Bra006394
Brassica rapa
Bra006394
I
Bra008563
Brassica rapa
Bra008563
I
Bra023610
Brassica rapa
Bra023610
I
Bra025914
Brassica rapa
Bra025914
I
Bra030496
Brassica rapa
Bra030496
I
Bra033291
Brassica rapa
Bra033291
I
Bra037365
Brassica rapa
Bra037365
I
Bra039503
Brassica rapa
Bra039503
I
BRADI1G29680
Brachypodium distachyon
BRADI1G29680
I
BRADI2G34670
Brachypodium distachyon
BRADI2G34670
I
BRADI3G16515
Brachypodium distachyon
BRADI3G16515
I
BRADI3G51960
Brachypodium distachyon
BRADI3G51960
I
BRADI5G19380
Brachypodium distachyon
BRADI5G19380
I
CHLREDRAFT_112628
Chlamydomonas reinhardtii
CHLREDRAFT_112628
I
CHLREDRAFT_123164
Chlamydomonas reinhardtii
CHLREDRAFT_123164
I
CMK043C
Cyanidioschyzon merolae
CMK043C
I
F775_18043
Aegilops tauschii
F775_18043
I
F775_22242
Aegilops tauschii
F775_22242
I
F775_23690
Aegilops tauschii
F775_23690
I
F775_26024
Aegilops tauschii
F775_26024
I
F775_27077
Aegilops tauschii
F775_27077
I
LHY
Arabidopsis lyrata
fgenesh2_kg.1__131__AT1G01060.3
I
fgenesh2_kg.1__2004__AT1G18330.2
Arabidopsis lyrata
fgenesh2_kg.1__2004__AT1G18330.2
I
RVE1
Arabidopsis lyrata
fgenesh2_kg.6__1729__AT5G17300.1
I
RVE2
Arabidopsis lyrata
fgenesh2_kg.7__3122__AT5G37260.1
I
GLYMA02G40800
Glycine max
GLYMA02G40800
I
GLYMA03G42260
Glycine max
GLYMA03G42260
I
GLYMA07G05410
Glycine max
GLYMA07G05410
I
GLYMA09G29800
Glycine max
GLYMA09G29800
I
GLYMA11G33180
Glycine max
GLYMA11G33180
I
GLYMA14G39130
Glycine max
GLYMA14G39130
I
GLYMA16G01980
Glycine max
GLYMA16G01980
I
GLYMA16G34340
Glycine max
GLYMA16G34340
I
GLYMA18G05050
Glycine max
GLYMA18G05050
I
GLYMA19G45030
Glycine max
GLYMA19G45030
I
GRMZM2G014902
Zea mays
GRMZM2G014902
I
GRMZM2G029850
Zea mays
GRMZM2G029850
I
GRMZM2G145041
Zea mays
GRMZM2G145041
I
GRMZM2G170322
Zea mays
GRMZM2G170322
I
GRMZM2G175265
Zea mays
GRMZM2G175265
I
GRMZM2G181030
Zea mays
GRMZM2G181030
I
GSMUA_Achr10G06560_001
Musa acuminata
GSMUA_Achr10G06560_001
I
GSMUA_Achr11G01420_001
Musa acuminata
GSMUA_Achr11G01420_001
I
GSMUA_Achr1G06360_001
Musa acuminata
GSMUA_Achr1G06360_001
I
GSMUA_Achr8G13440_001
Musa acuminata
GSMUA_Achr8G13440_001
I
GSMUA_AchrUn_randomG02340_001
Musa acuminata
GSMUA_AchrUn_randomG02340_001
I
GSMUA_AchrUn_randomG03000_001
Musa acuminata
GSMUA_AchrUn_randomG03000_001
I
LPERR02G22990
Leersia perrieri
LPERR02G22990
I
LPERR04G18770
Leersia perrieri
LPERR04G18770
I
LPERR06G23620
Leersia perrieri
LPERR06G23620
I
LPERR08G03480
Leersia perrieri
LPERR08G03480
I
MLOC_14118
Hordeum vulgare
MLOC_14118
I
MLOC_57684
Hordeum vulgare
MLOC_57684
I
MLOC_59912
Hordeum vulgare
MLOC_59912
I
MLOC_62877
Hordeum vulgare
MLOC_62877
I
MTR_3g064500
Medicago truncatula
MTR_3g064500
I
MTR_5g076960
Medicago truncatula
MTR_5g076960
I
MTR_6g477860
Medicago truncatula
MTR_6g477860
I
MTR_7g118330
Medicago truncatula
MTR_7g118330
I
OB02G35470
Oryza brachyantha
OB02G35470
I
OB04G29880
Oryza brachyantha
OB04G29880
I
OB05G14050
Oryza brachyantha
OB05G14050
I
OB06G35920
Oryza brachyantha
OB06G35920
I
OB08G13700
Oryza brachyantha
OB08G13700
I
OBART01G03720
Oryza barthii
OBART01G03720
I
OBART02G28240
Oryza barthii
OBART02G28240
I
OBART04G23030
Oryza barthii
OBART04G23030
I
OBART05G04360
Oryza barthii
OBART05G04360
I
OBART05G04370
Oryza barthii
OBART05G04370
I
OBART06G28140
Oryza barthii
OBART06G28140
I
OGLUM01G03980
Oryza glumaepatula
OGLUM01G03980
I
OGLUM02G28780
Oryza glumaepatula
OGLUM02G28780
I
OGLUM04G22920
Oryza glumaepatula
OGLUM04G22920
I
OGLUM05G04280
Oryza glumaepatula
OGLUM05G04280
I
OGLUM06G29530
Oryza glumaepatula
OGLUM06G29530
I
OGLUM08G03510
Oryza glumaepatula
OGLUM08G03510
I
OLONG_000103
Oryza longistaminata
OLONG_000103
I
OLONG_003280
Oryza longistaminata
OLONG_003280
I
OLONG_007470
Oryza longistaminata
OLONG_007470
I
OLONG_010266
Oryza longistaminata
OLONG_010266
I
OMERI01G03530
Oryza meridionalis
OMERI01G03530
I
OMERI02G27330
Oryza meridionalis
OMERI02G27330
I
OMERI04G19240
Oryza meridionalis
OMERI04G19240
I
OMERI05G04320
Oryza meridionalis
OMERI05G04320
I
OMERI06G28070
Oryza meridionalis
OMERI06G28070
I
OMERI08G03470
Oryza meridionalis
OMERI08G03470
I
ONIVA01G04110
Oryza nivara
ONIVA01G04110
I
ONIVA04G22180
Oryza nivara
ONIVA04G22180
I
ONIVA05G04710
Oryza nivara
ONIVA05G04710
I
ONIVA06G31120
Oryza nivara
ONIVA06G31120
I
ONIVA08G03410
Oryza nivara
ONIVA08G03410
I
ONIVA09G03730
Oryza nivara
ONIVA09G03730
I
OPUNC01G03310
Oryza punctata
OPUNC01G03310
I
OPUNC02G25920
Oryza punctata
OPUNC02G25920
I
OPUNC04G20560
Oryza punctata
OPUNC04G20560
I
OPUNC06G25680
Oryza punctata
OPUNC06G25680
I
OPUNC08G03280
Oryza punctata
OPUNC08G03280
I
ORGLA01G0032300
Oryza glaberrima
ORGLA01G0032300
I
ORGLA02G0242600
Oryza glaberrima
ORGLA02G0242600
I
ORGLA06G0287300
Oryza glaberrima
ORGLA06G0287300
I
ORGLA08G0028700
Oryza glaberrima
ORGLA08G0028700
I
ORUFI01G03800
Oryza rufipogon
ORUFI01G03800
I
ORUFI02G29720
Oryza rufipogon
ORUFI02G29720
I
ORUFI04G24740
Oryza rufipogon
ORUFI04G24740
I
ORUFI05G04560
Oryza rufipogon
ORUFI05G04560
I
ORUFI06G30080
Oryza rufipogon
ORUFI06G30080
I
OS01G0156000
Oryza sativa
OS01G0156000
I
OS02G0685200
Oryza sativa
OS02G0685200
I
OS04G0583900
Oryza sativa
OS04G0583900
I
OS05G0162800
Oryza sativa
OS05G0162800
I
OS06G0728700
Oryza sativa
OS06G0728700
I
OSTLU_5960
Ostreococcus lucimarinus
OSTLU_5960
I
OSTLU_6612
Ostreococcus lucimarinus
OSTLU_6612
I
OSTLU_9264
Ostreococcus lucimarinus
OSTLU_9264
I
PGSC0003DMG400011294
Solanum tuberosum
PGSC0003DMG400011294
I
PGSC0003DMG400021459
Solanum tuberosum
PGSC0003DMG400021459
I
PGSC0003DMG400025632
Solanum tuberosum
PGSC0003DMG400025632
I
POPTR_0002s18170
Populus trichocarpa
POPTR_0002s18170
I
POPTR_0004s07270
Populus trichocarpa
POPTR_0004s07270
I
POPTR_0012s03530
Populus trichocarpa
POPTR_0012s03530
I
POPTR_0014s10240
Populus trichocarpa
POPTR_0014s10240
I
POPTR_0015s05430
Populus trichocarpa
POPTR_0015s05430
I
POPTR_0017s01380
Populus trichocarpa
POPTR_0017s01380
I
PRUPE_ppa001765mg
Prunus persica
PRUPE_ppa001765mg
I
PRUPE_ppa004107mg
Prunus persica
PRUPE_ppa004107mg
I
PRUPE_ppa005083mg
Prunus persica
PRUPE_ppa005083mg
I
PRUPE_ppa006715mg
Prunus persica
PRUPE_ppa006715mg
I
Sb04g031590
Sorghum bicolor
Sb04g031590
I
Sb06g026500
Sorghum bicolor
Sb06g026500
I
Sb07g003870
Sorghum bicolor
Sb07g003870
I
Sb10g030960
Sorghum bicolor
Sb10g030960
I
CCA1
Arabidopsis lyrata
scaffold_403655.1
I
SELMODRAFT_19475
Selaginella moellendorffii
SELMODRAFT_19475
I
SELMODRAFT_29451
Selaginella moellendorffii
SELMODRAFT_29451
I
SELMODRAFT_78481
Selaginella moellendorffii
SELMODRAFT_78481
I
Si002704m.g
Setaria italica
Si002704m.g
I
Si006457m.g
Setaria italica
Si006457m.g
I
Si010077m.g
Setaria italica
Si010077m.g
I
Si014685m.g
Setaria italica
Si014685m.g
I
Si017289m.g
Setaria italica
Si017289m.g
I
Solyc02g036370.2
Solanum lycopersicum
Solyc02g036370.2
I
Solyc03g098320.2
Solanum lycopersicum
Solyc03g098320.2
I
Solyc10g005080.2
Solanum lycopersicum
Solyc10g005080.2
I
TCM_005021
Theobroma cacao
TCM_005021
I
TCM_013400
Theobroma cacao
TCM_013400
I
Traes_2AL_660616C44
Triticum aestivum
Traes_2AL_660616C44
I
Traes_2BL_3041037F1
Triticum aestivum
Traes_2BL_3041037F1
I
Traes_2DL_31EED5C94
Triticum aestivum
Traes_2DL_31EED5C94
I
Traes_6BL_2F2381640
Triticum aestivum
Traes_6BL_2F2381640
I
Traes_7AL_19F222799
Triticum aestivum
Traes_7AL_19F222799
I
Traes_7AL_665B92F4E
Triticum aestivum
Traes_7AL_665B92F4E
I
Traes_7BL_998EC9F74
Triticum aestivum
Traes_7BL_998EC9F74
I
Traes_7BL_BA181D2AD
Triticum aestivum
Traes_7BL_BA181D2AD
I
Traes_7DL_1D415A4CF
Triticum aestivum
Traes_7DL_1D415A4CF
I
Traes_7DL_310E46F15
Triticum aestivum
Traes_7DL_310E46F15
I
TRIUR3_01040
Triticum urartu
TRIUR3_01040
I
TRIUR3_06252
Triticum urartu
TRIUR3_06252
I
TRIUR3_13396
Triticum urartu
TRIUR3_13396
I
RVE1
Vitis vinifera
VIT_04s0079g00410
I
VIT_15s0048g02410
Vitis vinifera
VIT_15s0048g02410
I
VIT_16s0050g01180
Vitis vinifera
VIT_16s0050g01180
I
Ca_14385
Cicer arietinum
Ca_14385
I
Ca_18030
Cicer arietinum
Ca_18030
I
Cla009284
Citrullus lanatus
Cla009284
I
Cla018914
Citrullus lanatus
Cla018914
I
Pm012998
Prunus mume
Pm012998
I
Pm025253
Prunus mume
Pm025253
I
Pm028731
Prunus mume
Pm028731
I
Pm028732
Prunus mume
Pm028732
I
29677.m000183
Ricinus communis
29677.m000183
I
30076.m004464
Ricinus communis
30076.m004464
I
30171.m000418
Ricinus communis
30171.m000418
I
cassava33517.m1
Manihot esculenta
cassava33517.m1
I
cassava35529.valid.m1
Manihot esculenta
cassava35529.valid.m1
I
cassava35530.valid.m1
Manihot esculenta
cassava35530.valid.m1
I
cassava35531.valid.m1
Manihot esculenta
cassava35531.valid.m1
I
cassava36126.valid.m1
Manihot esculenta
cassava36126.valid.m1
I
Cucsa.112530
Cucumis sativus
Cucsa.112530
I
Cucsa.278220
Cucumis sativus
Cucsa.278220
I
Cucsa.349800
Cucumis sativus
Cucsa.349800
I
e_gw1.96.88.1
Physcomitrella patens
e_gw1.96.88.1
I
EuGene.0000110367
Micromonas pusilla
EuGene.0000110367
I
EuGene.0400010070
Ostreococcus RCC809
EuGene.0400010070
I
gw1.1.364.1
Volvox carteri
gw1.1.364.1
I
gw1.325.30.1
Physcomitrella patens
gw1.325.30.1
I
gw1.6.1363.1
Ostreococcus RCC809
gw1.6.1363.1
I
gw1.8.161.1
Volvox carteri
gw1.8.161.1
I
gw1.9.308.1
Chlorella NC64A
gw1.9.308.1
I
mgf001364m
Mimulus guttatus
mgf001364m
I
mgf011909m
Mimulus guttatus
mgf011909m
I
mgf014004m
Mimulus guttatus
mgf014004m
I
mgf021826m
Mimulus guttatus
mgf021826m
I
Aquca_002_01329
Aquilegia coerulea
Aquca_002_01329
I
Aquca_013_00001
Aquilegia coerulea
Aquca_013_00001
I
Bostr.10064s0009
Boechera stricta
Bostr.10064s0009
I
Bostr.25993s0083
Boechera stricta
Bostr.25993s0083
I
Bostr.2618s0066
Boechera stricta
Bostr.2618s0066
I
Bostr.5325s0026
Boechera stricta
Bostr.5325s0026
I
Bostr.7128s0434
Boechera stricta
Bostr.7128s0434
I
Bostr.9638s0043
Boechera stricta
Bostr.9638s0043
I
Cagra.0050s0017
Capsella grandiflora
Cagra.0050s0017
I
Cagra.0909s0012
Capsella grandiflora
Cagra.0909s0012
I
Cagra.1968s0051
Capsella grandiflora
Cagra.1968s0051
I
Cagra.25009s0002
Capsella grandiflora
Cagra.25009s0002
I
Cagra.4849s0004
Capsella grandiflora
Cagra.4849s0004
I
Cagra.6594s0025
Capsella grandiflora
Cagra.6594s0025
I
Carubv10001147m.g
Capsella rubella
Carubv10001147m.g
I
Carubv10001399m.g
Capsella rubella
Carubv10001399m.g
I
Carubv10005376m.g
Capsella rubella
Carubv10005376m.g
I
Carubv10008551m.g
Capsella rubella
Carubv10008551m.g
I
Carubv10009624m.g
Capsella rubella
Carubv10009624m.g
I
Carubv10022831m.g
Capsella rubella
Carubv10022831m.g
I
Ciclev10011554m.g
Citrus clementina
Ciclev10011554m.g
I
Ciclev10018964m.g
Citrus clementina
Ciclev10018964m.g
I
Ciclev10020130m.g
Citrus clementina
Ciclev10020130m.g
I
estExt_fgenesh2_pg.C_Chr_080053
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_080053
I
Eucgr.D02651
Eucalyptus grandis
Eucgr.D02651
I
Eucgr.F02906
Eucalyptus grandis
Eucgr.F02906
I
Eucgr.K02302
Eucalyptus grandis
Eucgr.K02302
I
evm.TU.supercontig_1055.1
Carica papaya
evm.TU.supercontig_1055.1
I
evm.TU.supercontig_178.22
Carica papaya
evm.TU.supercontig_178.22
I
evm.TU.supercontig_7.134
Carica papaya
evm.TU.supercontig_7.134
I
gene09296-v1.0-hybrid
Fragaria vesca
gene09296-v1.0-hybrid
I
Genemark1.422_g
Coccomyxa subellipsoidea C169
Genemark1.422_g
I
Gorai.001G069700
Gossypium raimondii
Gorai.001G069700
I
Gorai.004G159700
Gossypium raimondii
Gorai.004G159700
I
Gorai.007G113900
Gossypium raimondii
Gorai.007G113900
I
Gorai.008G131800
Gossypium raimondii
Gorai.008G131800
I
Gorai.008G132000
Gossypium raimondii
Gorai.008G132000
I
Gorai.008G293600
Gossypium raimondii
Gorai.008G293600
I
Lus10005134.g
Linum usitatissimum
Lus10005134.g
I
Lus10010100.g
Linum usitatissimum
Lus10010100.g
I
Lus10026365.g
Linum usitatissimum
Lus10026365.g
I
Lus10030184.g
Linum usitatissimum
Lus10030184.g
I
Lus10031322.g
Linum usitatissimum
Lus10031322.g
I
Lus10031893.g
Linum usitatissimum
Lus10031893.g
I
Lus10042292.g
Linum usitatissimum
Lus10042292.g
I
MDP0000187927
Malus domestica
MDP0000187927
I
MDP0000193097
Malus domestica
MDP0000193097
I
MDP0000269098
Malus domestica
MDP0000269098
I
MDP0000581293
Malus domestica
MDP0000581293
I
MDP0000795432
Malus domestica
MDP0000795432
I
MDP0000890154
Malus domestica
MDP0000890154
I
orange1.1g004262m.g
Citrus sinensis
orange1.1g004262m.g
I
orange1.1g012625m.g
Citrus sinensis
orange1.1g012625m.g
I
orange1.1g021851m.g
Citrus sinensis
orange1.1g021851m.g
I
Pavir.Aa00960
Panicum virgatum
Pavir.Aa00960
I
Pavir.Ab02717
Panicum virgatum
Pavir.Ab02717
I
Pavir.Db00044
Panicum virgatum
Pavir.Db00044
I
Pavir.Fa01905
Panicum virgatum
Pavir.Fa01905
I
Pavir.Gb00859
Panicum virgatum
Pavir.Gb00859
I
Pavir.J00602
Panicum virgatum
Pavir.J00602
I
Pavir.J10427
Panicum virgatum
Pavir.J10427
I
Pavir.J34894
Panicum virgatum
Pavir.J34894
I
SapurV1A.0003s0380
Salix purpurea
SapurV1A.0003s0380
I
SapurV1A.0074s0170
Salix purpurea
SapurV1A.0074s0170
I
SapurV1A.0147s0490
Salix purpurea
SapurV1A.0147s0490
I
SapurV1A.0162s0390
Salix purpurea
SapurV1A.0162s0390
I
SapurV1A.0202s0430
Salix purpurea
SapurV1A.0202s0430
I
SapurV1A.0985s0170
Salix purpurea
SapurV1A.0985s0170
I
Thhalv10007028m.g
Eutrema salsugineum
Thhalv10007028m.g
I
Thhalv10008035m.g
Eutrema salsugineum
Thhalv10008035m.g
I
Thhalv10013821m.g
Eutrema salsugineum
Thhalv10013821m.g
I
Thhalv10028153m.g
Eutrema salsugineum
Thhalv10028153m.g
I
Thhalv10028806m.g
Eutrema salsugineum
Thhalv10028806m.g
I
PK02302.1
Cannabis sativa
PK02302.1
I
PK20866.1
Cannabis sativa
PK20866.1
I
PK28456.1
Cannabis sativa
PK28456.1
I
chr3.CM0208.410.nd
Lotus japonicus
chr3.CM0208.410.nd
I
fgeneshCV_pg.C_scaffold_1000277
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_1000277
I
LjSGA_026437.1
Lotus japonicus
LjSGA_026437.1
I
PDK_20s1315421g001
Phoenix dactylifera
PDK_20s1315421g001
I
PDK_20s1414244g001
Phoenix dactylifera
PDK_20s1414244g001
I
Pavir.J12412
Panicum virgatum
Pavir.J12412
N