TT1 (Arabidopsis lyrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 fgenesh2_kg.1__3606__AT1G34790.1 T117349_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__3606__AT1G34790.1 C2H2 ZF 227 248
fgenesh2_kg.1__3606__AT1G34790.1 C2H2 ZF 247 273

Links

Other C2H2 ZF family TFs
Other Arabidopsis lyrata TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
D918_01175 Trichuris suis D918_01175 I
TTRE_0000156401 Trichuris trichiura TTRE_0000156401 I
TMUE_s0064002300 Trichuris muris TMUE_s0064002300 I
TCNE_0001220201 Toxocara canis TCNE_0001220201 I
TCLT_0000472801 Thelazia callipaeda TCLT_0000472801 I
SMUV_0001104401 Syphacia muris SMUV_0001104401 I
nOo.2.0.1.g07043 Onchocerca ochengi nOo.2.0.1.g07043 I
nLs.2.1.2.g09168 Litomosoides sigmodontis nLs.2.1.2.g09168 I
nDi.2.2.2.g10740 Dirofilaria immitis nDi.2.2.2.g10740 I
EVEC_0000549701 Enterobius vermicularis EVEC_0000549701 I
DME_0000608401 Dracunculus medinensis DME_0000608401 I
WUBG_04696 Wuchereria bancrofti WUBG_04696 I
D917_07972 Trichinella nativa D917_07972 I
BXY_0993100 Bursaphelenchus xylophilus BXY_0993100 I
BTMF_0000836601 Brugia timori BTMF_0000836601 I
ASU_05469 Ascaris suum ASU_05469 I
WBGene00238199 Onchocerca volvulus WBGene00238199 I
LOAG_11444 Loa loa LOAG_11444 I
EFV52614 Trichinella spiralis EFV52614 I
DAPPUDRAFT_319330 Daphnia pulex DAPPUDRAFT_319330 I
Bm3574 Brugia malayi Bm3574 I
MhA1_Contig1748.frz3.gene3 Meloidogyne hapla MhA1_Contig1748.frz3.gene3 N
Minc14190 Meloidogyne incognita Minc14190 N
Ppa-blmp-1 Pristionchus pacificus PPA04977 N
snap_masked-nMf.1.1.scaf01565-processed-gene-0.4 Meloidogyne floridensis snap_masked-nMf.1.1.scaf01565-processed-gene-0.4 N