CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.28083.9723
(
Phytophthora lateralis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
fgenesh_scip_prom.28083.9723
T117403_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.28083.9723
C2H2 ZF
46
70
HACPESSCKRQFTRKYTLVEHAKTH
fgenesh_scip_prom.28083.9723
C2H2 ZF
76
100
HVCPVRTCAKHFSTSGNLSRHKRLH
fgenesh_scip_prom.28083.9723
C2H2 ZF
106
130
LPCPVQGCICTFPSQNKLEKHMKFH
fgenesh_scip_prom.28083.9723
C2H2 ZF
137
161
ICVLPGCGKTFSTTGNLNRHLKHQH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora lateralis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_17708
Selaginella moellendorffii
SELMODRAFT_17708
I
SELMODRAFT_28575
Selaginella moellendorffii
SELMODRAFT_28575
I
Lus10039171.g
Linum usitatissimum
Lus10039171.g
I
PGSC0003DMG400008352
Solanum tuberosum
PGSC0003DMG400008352
N
Solyc10g078610.1
Solanum lycopersicum
Solyc10g078610.1
N