GSMUA_Achr6G15360_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr6G15360_001 T118718_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.795 0.826
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.795 0.826
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.795 0.761
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.786 0.761
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.786 0.761
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.774 0.696
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.771 0.761
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.763 0.804
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P15360_001 C2H2 ZF 43 65
GSMUA_Achr6P15360_001 C2H2 ZF 86 108

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

383 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FGRRES_07198 Fusarium graminearum FGRRES_07198 D 0.000
MBR_06137 Metarhizium brunneum MBR_06137 I 0.000
estExt_Genewise1Plus.C_13560 Cryphonectria parasitica estExt_Genewise1Plus.C_13560 I 0.000
e_gw1.6.920.1 Nectria haematococca e_gw1.6.920.1 I 0.000
X797_010350 Metarhizium robertsii X797_010350 I 0.000
VHEMI01120 Torrubiella hemipterigena VHEMI01120 I 0.000
UCREL1_367 Eutypa lata UCREL1_367 I 0.000
TRIVIDRAFT_188169 Trichoderma virens TRIVIDRAFT_188169 I 0.000
TRIREDRAFT_53877 Trichoderma reesei TRIREDRAFT_53877 I 0.000
TRIATDRAFT_233204 Trichoderma atroviride TRIATDRAFT_233204 I 0.000
SPBR_05567 Sporothrix brasiliensis SPBR_05567 I 0.000
NechaG49195 Fusarium solani NechaG49195 I 0.000
MGU_10045 Metarhizium guizhouense MGU_10045 I 0.000
A1O7_09309 Cladophialophora yegresii A1O7_09309 I 0.000
MANI_121894 Metarhizium anisopliae MANI_121894 I 0.000
MAJ_08974 Metarhizium majus MAJ_08974 I 0.000
MAC_00750 Metarhizium acridum MAC_00750 I 0.000
GLRG_04974 Colletotrichum graminicola GLRG_04974 I 0.000
FVEG_07955 Fusarium verticillioides FVEG_07955 I 0.000
FPSE_03183 Fusarium pseudograminearum FPSE_03183 I 0.000
FOXG_01595 Fusarium oxysporum FOXG_01595 I 0.000
F503_07199 Ophiostoma piceae uamh F503_07199 I 0.000
PV05_04070 Exophiala xenobiotica PV05_04070 N 0.000
PV11_00701 Exophiala sideris PV11_00701 N 0.000
G647_09259 Cladophialophora carrionii G647_09259 N 0.000
Cob_04241 Colletotrichum orbiculare Cob_04241 N 0.000
CGGC5_834 Colletotrichum gloeosporioides CGGC5_834 N 0.000
CCM_07768 Cordyceps militaris CCM_07768 N 0.000