CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_13560
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1Plus.C_13560
T391207_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_07198
M01415_2.00
Fusarium graminearum
HCGGRDWTAN
NTAWHYCCGD
PBM
Lambert et al.(2019)
pTH11409
0.557
0.744
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_13560
Zinc cluster
34
74
LSCAPCRMSKLKCDRGVPCSQCLKKARPSACVYAPKPVRNR
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_02662
Beauveria bassiana
BBA_02662
I
0.594
CCM_07768
Cordyceps militaris
CCM_07768
N
0.574
VHEMI01120
Torrubiella hemipterigena
VHEMI01120
I
0.570
MAJ_08974
Metarhizium majus
MAJ_08974
I
0.561
MANI_121894
Metarhizium anisopliae
MANI_121894
I
0.561
MBR_06137
Metarhizium brunneum
MBR_06137
I
0.561
MGU_10045
Metarhizium guizhouense
MGU_10045
I
0.561
X797_010350
Metarhizium robertsii
X797_010350
I
0.561
FGRRES_07198
Fusarium graminearum
FGRRES_07198
D
0.557
FPSE_03183
Fusarium pseudograminearum
FPSE_03183
I
0.557
F503_07199
Ophiostoma piceae uamh
F503_07199
I
0.546
HMPREF1624_04628
Sporothrix schenckii
HMPREF1624_04628
I
0.546
SPBR_05567
Sporothrix brasiliensis
SPBR_05567
I
0.546
FOXG_01595
Fusarium oxysporum
FOXG_01595
I
0.540
FVEG_07955
Fusarium verticillioides
FVEG_07955
I
0.540
NechaG49195
Fusarium solani
NechaG49195
I
0.540
e_gw1.6.920.1
Nectria haematococca
e_gw1.6.920.1
I
0.540
UCREL1_367
Eutypa lata
UCREL1_367
I
0.538