CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG97874
(
Lottia gigantea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
LotgiG97874
T121878_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP97874
C2H2 ZF
5
28
FPCSQCRYTTDRRNNLKRHMLTMH
LotgiP97874
C2H2 ZF
38
56
CGILFTTKASLREHAMIFH
LotgiP97874
C2H2 ZF
60
82
YTCFYCGRRFCRKALLKRHLSVH
LotgiP97874
C2H2 ZF
88
110
FVCTVCDYATSHKSNLERHRKVH
Links
Other
C2H2 ZF
family TFs
Other
Lottia gigantea
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA034855
Oryza indica
BGIOSGA034855
N
OB11G13310
Oryza brachyantha
OB11G13310
N
OGLUM11G03650
Oryza glumaepatula
OGLUM11G03650
N
OLONG_001597
Oryza longistaminata
OLONG_001597
N
OMERI11G03580
Oryza meridionalis
OMERI11G03580
N
ONIVA11G04040
Oryza nivara
ONIVA11G04040
N
ORGLA11G0036600
Oryza glaberrima
ORGLA11G0036600
N
OS11G0160550
Oryza sativa
OS11G0160550
N