CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA11G04040
(
Oryza nivara
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ONIVA11G04040
T200871_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA11G04040.1
GRAS
133
481
LSDLLLAGAEAVEAGDSILASVAFSRLDDFLSGIPENGAASSFDRLAYHFDQGLRSRMSSASTGCYQPEPLPSGNMLVHQIIQELSPFVKFAHFTTNQAILDAIIGDMDVHVVDLNIGEGIQWSSLMSDLARCGGKFFRLTAITTYADCHASTHDTVVRLLSEFADSLELPFQYNSICVHNEDELHAFFEDCKGSVIVSCDTTSMYYKSLSTLQSLLLVCVKKLQPKLVVTIEEDLVRIGRGVSPSSASFVEFFFEALHHFTTVFESMASCFIGSSYEPCLRLVEMELLGPRIQDFVVKYGSVRVEANASEVLEGFMACELSACNIAQARMLVGLFNRPNKVIWSSLAA
Links
Other
GRAS
family TFs
Other
Oryza nivara
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM11G03650
Oryza glumaepatula
OGLUM11G03650
N
0.958
ORGLA11G0036600
Oryza glaberrima
ORGLA11G0036600
N
0.950
ORUFI11G03860
Oryza rufipogon
ORUFI11G03860
N
0.947
OLONG_001597
Oryza longistaminata
OLONG_001597
N
0.931
BGIOSGA034855
Oryza indica
BGIOSGA034855
N
0.920
OS11G0160550
Oryza sativa
OS11G0160550
N
0.917
OMERI11G03580
Oryza meridionalis
OMERI11G03580
N
0.903
OB11G13310
Oryza brachyantha
OB11G13310
N
0.776