OGLUM03G09920 (Oryza glumaepatula)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OGLUM03G09920 T124717_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.812 0.952
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.812 0.952
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM03G09920.1 C2H2 ZF 175 196
OGLUM03G09920.1 C2H2 ZF 196 221

Links

Other C2H2 ZF family TFs
Other Oryza glumaepatula TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG01251 Caenorhabditis briggsae CBG01251 I
CBG17906 Caenorhabditis briggsae CBG17906 I
nhr-156 Caenorhabditis elegans WBGene00015897 N