Sb03g041170 (Sorghum bicolor)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Sb03g041170 T128231_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.803 0.929
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.803 0.929
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb03g041170.1 C2H2 ZF 365 387
Sb03g041170.1 C2H2 ZF 388 413
Sb03g041170.2 C2H2 ZF 365 387
Sb03g041170.2 C2H2 ZF 388 413

Links

Other C2H2 ZF family TFs
Other Sorghum bicolor TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400008337 Solanum tuberosum PGSC0003DMG400008337 N
PGSC0003DMG400020012 Solanum tuberosum PGSC0003DMG400020012 N
PGSC0003DMG400027575 Solanum tuberosum PGSC0003DMG400027575 N
PGSC0003DMG400042926 Solanum tuberosum PGSC0003DMG400042926 N
Solyc03g093890.2 Solanum lycopersicum Solyc03g093890.2 N
Solyc03g093930.2 Solanum lycopersicum Solyc03g093930.2 N
Solyc03g093940.1 Solanum lycopersicum Solyc03g093940.1 N
Solyc06g033870.1 Solanum lycopersicum Solyc06g033870.1 N
Solyc06g034000.1 Solanum lycopersicum Solyc06g034000.1 N
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N