CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PGSC0003DMG400020012
(
Solanum tuberosum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PGSC0003DMG400020012
T277643_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400051510
Myb
6
53
KGAWSPEEDQKMIDYIMQYRIWNWSHMPKFAGLSRTGKSCRLRWINYL
PGSC0003DMT400051510
Myb
59
104
KGPFSMEEVEIVFRMYQSLGNKWSAIAKELPGRTDNEIKNFYHTHL
Links
Other
Myb/SANT
family TFs
Other
Solanum tuberosum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400020013
Solanum tuberosum
PGSC0003DMG400020013
N
0.877
Solyc06g034000.1
Solanum lycopersicum
Solyc06g034000.1
N
0.844
PGSC0003DMG400042926
Solanum tuberosum
PGSC0003DMG400042926
N
0.758
Solyc03g093930.2
Solanum lycopersicum
Solyc03g093930.2
N
0.758
Solyc06g033870.1
Solanum lycopersicum
Solyc06g033870.1
N
0.753
Solyc03g093940.1
Solanum lycopersicum
Solyc03g093940.1
N
0.729
PGSC0003DMG400008337
Solanum tuberosum
PGSC0003DMG400008337
N
0.728
Solyc03g093890.2
Solanum lycopersicum
Solyc03g093890.2
N
0.724
PGSC0003DMG400027575
Solanum tuberosum
PGSC0003DMG400027575
N
0.693
VIT_00s0203g00170
Vitis vinifera
VIT_00s0203g00170
N
0.661