SINV14822 (Solenopsis invicta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SINV14822 T128807_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.773 0.867
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.773 0.867
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.773 0.867
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV14822-PA C2H2 ZF 312 334
SINV14822-PA C2H2 ZF 344 365
SINV14822-PA C2H2 ZF 369 391
SINV14822-PA C2H2 ZF 397 419
SINV14822-PA C2H2 ZF 425 446

Links

Other C2H2 ZF family TFs
Other Solenopsis invicta TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORGLA01G0333300 Oryza glaberrima ORGLA01G0333300 N
PDK_20s1392371g003 Phoenix dactylifera PDK_20s1392371g003 N
Pavir.J36240 Panicum virgatum Pavir.J36240 N
Pavir.J20385 Panicum virgatum Pavir.J20385 N
Pavir.J01797 Panicum virgatum Pavir.J01797 N
Pavir.Ea03635 Panicum virgatum Pavir.Ea03635 N
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N
TRIUR3_26381 Triticum urartu TRIUR3_26381 N
TRAES3BF021600230CFD_g Triticum aestivum TRAES3BF021600230CFD_g N
Traes_3AL_6E16C8167 Triticum aestivum Traes_3AL_6E16C8167 N
Si000832m.g Setaria italica Si000832m.g N
Sb09g020850 Sorghum bicolor Sb09g020850 N
Sb03g041760 Sorghum bicolor Sb03g041760 N
OS01G0881500 Oryza sativa OS01G0881500 N
ORUFI01G42800 Oryza rufipogon ORUFI01G42800 N
BRADI2G56910 Brachypodium distachyon BRADI2G56910 N
OPUNC01G38160 Oryza punctata OPUNC01G38160 N
ONIVA01G44280 Oryza nivara ONIVA01G44280 N
OMERI01G36330 Oryza meridionalis OMERI01G36330 N
OLONG_003002 Oryza longistaminata OLONG_003002 N
OGLUM01G43650 Oryza glumaepatula OGLUM01G43650 N
OBART01G39420 Oryza barthii OBART01G39420 N
OB01G48180 Oryza brachyantha OB01G48180 N
MLOC_6971 Hordeum vulgare MLOC_6971 N
LPERR01G33950 Leersia perrieri LPERR01G33950 N
GSMUA_Achr3G02410_001 Musa acuminata GSMUA_Achr3G02410_001 N
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N
GRMZM2G153333 Zea mays GRMZM2G153333 N
F775_25916 Aegilops tauschii F775_25916 N