Pavir.J36240 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.J36240 T203094_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J36240.1.p GRAS 192 562

Links

Other GRAS family TFs
Other Panicum virgatum TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J01797 Panicum virgatum Pavir.J01797 N 0.970
Si021635m.g Setaria italica Si021635m.g N 0.967
Sb09g020850 Sorghum bicolor Sb09g020850 N 0.930
GRMZM2G153333 Zea mays GRMZM2G153333 N 0.916
OGLUM01G43650 Oryza glumaepatula OGLUM01G43650 N 0.859
ORGLA01G0333300 Oryza glaberrima ORGLA01G0333300 N 0.859
OMERI01G36330 Oryza meridionalis OMERI01G36330 N 0.859
OBART01G39420 Oryza barthii OBART01G39420 N 0.859
OPUNC01G38160 Oryza punctata OPUNC01G38160 N 0.856
ONIVA01G44280 Oryza nivara ONIVA01G44280 N 0.856
ORUFI01G42800 Oryza rufipogon ORUFI01G42800 N 0.856
OLONG_003002 Oryza longistaminata OLONG_003002 N 0.856
Sb03g041760 Sorghum bicolor Sb03g041760 N 0.854
Si000832m.g Setaria italica Si000832m.g N 0.854
OS01G0881500 Oryza sativa OS01G0881500 N 0.854
LPERR01G33950 Leersia perrieri LPERR01G33950 N 0.848
BRADI2G56910 Brachypodium distachyon BRADI2G56910 N 0.846
OB01G48180 Oryza brachyantha OB01G48180 N 0.843
Pavir.J20385 Panicum virgatum Pavir.J20385 N 0.843
Pavir.Ea03635 Panicum virgatum Pavir.Ea03635 N 0.843
Traes_3AL_6E16C8167 Triticum aestivum Traes_3AL_6E16C8167 N 0.827
F775_25916 Aegilops tauschii F775_25916 N 0.827
TRIUR3_26381 Triticum urartu TRIUR3_26381 N 0.824
TRAES3BF021600230CFD_g Triticum aestivum TRAES3BF021600230CFD_g N 0.821
MLOC_6971 Hordeum vulgare MLOC_6971 N 0.818
Traes_3DL_BF7D83705 Triticum aestivum Traes_3DL_BF7D83705 N 0.805
chr1.CM0982.460.nd Lotus japonicus chr1.CM0982.460.nd N 0.728
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N 0.726
GSMUA_Achr3G02410_001 Musa acuminata GSMUA_Achr3G02410_001 N 0.718
PDK_20s1392371g003 Phoenix dactylifera PDK_20s1392371g003 N 0.712
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.707