chr1.CM0982.460.nd (Lotus japonicus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 chr1.CM0982.460.nd T203270_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0982.460.nd GRAS 1 180

Links

Other GRAS family TFs
Other Lotus japonicus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_3g089055 Medicago truncatula MTR_3g089055 N 0.922
GLYMA06G12701 Glycine max GLYMA06G12701 N 0.917
GLYMA04G42090 Glycine max GLYMA04G42090 N 0.900
MTR_1g029420 Medicago truncatula MTR_1g029420 N 0.889
Ca_03920 Cicer arietinum Ca_03920 N 0.883
Ca_13101 Cicer arietinum Ca_13101 N 0.878
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N 0.867
orange1.1g007853m.g Citrus sinensis orange1.1g007853m.g N 0.861
Ciclev10000671m.g Citrus clementina Ciclev10000671m.g N 0.861
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.856
cassava26784.m1 Manihot esculenta cassava26784.m1 N 0.856
TCM_035362 Theobroma cacao TCM_035362 N 0.856
gene01015-v1.0-hybrid Fragaria vesca gene01015-v1.0-hybrid N 0.856
29648.m001919 Ricinus communis 29648.m001919 N 0.850
cassava42388.valid.m1 Manihot esculenta cassava42388.valid.m1 N 0.844
GLYMA13G09220 Glycine max GLYMA13G09220 N 0.844
PRUPE_ppa003310mg Prunus persica PRUPE_ppa003310mg N 0.839
Pm022704 Prunus mume Pm022704 N 0.833
POPTR_0002s07430 Populus trichocarpa POPTR_0002s07430 N 0.833
POPTR_0005s20890 Populus trichocarpa POPTR_0005s20890 N 0.833
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N 0.828
SapurV1A.0267s0240 Salix purpurea SapurV1A.0267s0240 N 0.817
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N 0.811
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N 0.806
VIT_04s0044g01370 Vitis vinifera VIT_04s0044g01370 N 0.794
GSMUA_Achr6G11780_001 Musa acuminata GSMUA_Achr6G11780_001 N 0.789
SCL1 Arabidopsis lyrata fgenesh2_kg.1__2335__AT1G21450.1 N 0.789
Bo5g034360 Brassica oleracea Bo5g034360 N 0.783
Cla015267 Citrullus lanatus Cla015267 N 0.783
Bra017915 Brassica rapa Bra017915 N 0.783
Cagra.1632s0036 Capsella grandiflora Cagra.1632s0036 N 0.778
Thhalv10007142m.g Eutrema salsugineum Thhalv10007142m.g N 0.778
Bostr.25570s0024 Boechera stricta Bostr.25570s0024 N 0.772
TRAES3BF021600230CFD_g Triticum aestivum TRAES3BF021600230CFD_g N 0.772
Traes_3AL_6E16C8167 Triticum aestivum Traes_3AL_6E16C8167 N 0.767
MLOC_6971 Hordeum vulgare MLOC_6971 N 0.767
TRIUR3_26381 Triticum urartu TRIUR3_26381 N 0.767
F775_25916 Aegilops tauschii F775_25916 N 0.767
Bra012280 Brassica rapa Bra012280 N 0.767
Bo7g059410 Brassica oleracea Bo7g059410 N 0.767
OPUNC01G38160 Oryza punctata OPUNC01G38160 N 0.767
OLONG_003002 Oryza longistaminata OLONG_003002 N 0.767
ORUFI01G42800 Oryza rufipogon ORUFI01G42800 N 0.767
AMTR_s00186p00018500 Amborella trichopoda AMTR_s00186p00018500 N 0.761
OB01G48180 Oryza brachyantha OB01G48180 N 0.756
Pavir.Ea03635 Panicum virgatum Pavir.Ea03635 N 0.756
Sb03g041760 Sorghum bicolor Sb03g041760 N 0.750
Si000832m.g Setaria italica Si000832m.g N 0.750
Pavir.J20385 Panicum virgatum Pavir.J20385 N 0.744
OMERI01G36330 Oryza meridionalis OMERI01G36330 N 0.744
Pavir.J01797 Panicum virgatum Pavir.J01797 N 0.733
Pavir.J36240 Panicum virgatum Pavir.J36240 N 0.728
Sb09g020850 Sorghum bicolor Sb09g020850 N 0.706