cassava26784.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava26784.m1 T202072_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava26784.m1 GRAS 80 450

Links

Other GRAS family TFs
Other Manihot esculenta TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava42388.valid.m1 Manihot esculenta cassava42388.valid.m1 N 0.927
29648.m001919 Ricinus communis 29648.m001919 N 0.900
POPTR_0002s07430 Populus trichocarpa POPTR_0002s07430 N 0.883
POPTR_0005s20890 Populus trichocarpa POPTR_0005s20890 N 0.873
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N 0.870
SapurV1A.0267s0240 Salix purpurea SapurV1A.0267s0240 N 0.865
chr1.CM0982.460.nd Lotus japonicus chr1.CM0982.460.nd N 0.856
TCM_035362 Theobroma cacao TCM_035362 N 0.848
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N 0.844
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N 0.840
evm.TU.supercontig_26.96 Carica papaya evm.TU.supercontig_26.96 N 0.838
orange1.1g007853m.g Citrus sinensis orange1.1g007853m.g N 0.835
Ciclev10000671m.g Citrus clementina Ciclev10000671m.g N 0.835
gene01015-v1.0-hybrid Fragaria vesca gene01015-v1.0-hybrid N 0.829
PRUPE_ppa003310mg Prunus persica PRUPE_ppa003310mg N 0.827
Lus10042776.g Linum usitatissimum Lus10042776.g N 0.824
MDP0000727836 Malus domestica MDP0000727836 N 0.824
MDP0000859087 Malus domestica MDP0000859087 N 0.824
Pm022704 Prunus mume Pm022704 N 0.821
Lus10029747.g Linum usitatissimum Lus10029747.g N 0.816
PK29476.1 Cannabis sativa PK29476.1 N 0.808
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N 0.808
Ca_13101 Cicer arietinum Ca_13101 N 0.808
MTR_1g029420 Medicago truncatula MTR_1g029420 N 0.805
SCL1 Vitis vinifera VIT_18s0001g15270 N 0.797
VIT_04s0044g01370 Vitis vinifera VIT_04s0044g01370 N 0.783
MTR_3g089055 Medicago truncatula MTR_3g089055 N 0.783
LjSGA_053605.1 Lotus japonicus LjSGA_053605.1 N 0.779
GLYMA06G12701 Glycine max GLYMA06G12701 N 0.778
GLYMA04G42090 Glycine max GLYMA04G42090 N 0.775
Ca_03920 Cicer arietinum Ca_03920 N 0.775
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N 0.775
Cucsa.079150 Cucumis sativus Cucsa.079150 N 0.772
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.772
mgf010500m Mimulus guttatus mgf010500m N 0.772
GLYMA13G09220 Glycine max GLYMA13G09220 N 0.768
Cla015267 Citrullus lanatus Cla015267 N 0.762
PDK_20s1392371g003 Phoenix dactylifera PDK_20s1392371g003 N 0.760
GLYMA14G27290 Glycine max GLYMA14G27290 N 0.759
GSMUA_Achr3G02410_001 Musa acuminata GSMUA_Achr3G02410_001 N 0.756
SCL1 Arabidopsis lyrata fgenesh2_kg.1__2335__AT1G21450.1 N 0.751
AMTR_s00186p00018500 Amborella trichopoda AMTR_s00186p00018500 N 0.748
Bra017915 Brassica rapa Bra017915 N 0.746
Thhalv10007142m.g Eutrema salsugineum Thhalv10007142m.g N 0.745
Bo5g034360 Brassica oleracea Bo5g034360 N 0.743
SCL1 Arabidopsis thaliana AT1G21450 N 0.741
PGSC0003DMG400024853 Solanum tuberosum PGSC0003DMG400024853 N 0.740
Solyc04g064550.1 Solanum lycopersicum Solyc04g064550.1 N 0.737
Cagra.1632s0036 Capsella grandiflora Cagra.1632s0036 N 0.735
Bostr.25570s0024 Boechera stricta Bostr.25570s0024 N 0.732
Carubv10008658m.g Capsella rubella Carubv10008658m.g N 0.732
Bra012280 Brassica rapa Bra012280 N 0.730
Bo7g059410 Brassica oleracea Bo7g059410 N 0.722
Ca_13102 Cicer arietinum Ca_13102 N 0.718
GSMUA_Achr6G11780_001 Musa acuminata GSMUA_Achr6G11780_001 N 0.713
ORGLA01G0333300 Oryza glaberrima ORGLA01G0333300 N 0.710
OGLUM01G43650 Oryza glumaepatula OGLUM01G43650 N 0.710
OBART01G39420 Oryza barthii OBART01G39420 N 0.710
OMERI01G36330 Oryza meridionalis OMERI01G36330 N 0.710
OPUNC01G38160 Oryza punctata OPUNC01G38160 N 0.710
BGIOSGA000383 Oryza indica BGIOSGA000383 N 0.708
ONIVA01G44280 Oryza nivara ONIVA01G44280 N 0.707
OS01G0881500 Oryza sativa OS01G0881500 N 0.707
ORUFI01G42800 Oryza rufipogon ORUFI01G42800 N 0.707
OLONG_003002 Oryza longistaminata OLONG_003002 N 0.707
Sb03g041760 Sorghum bicolor Sb03g041760 N 0.705
OB01G48180 Oryza brachyantha OB01G48180 N 0.705