29648.m001919 (Ricinus communis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 29648.m001919 T202005_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29648.m001919 GRAS 188 559

Links

Other GRAS family TFs
Other Ricinus communis TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava26784.m1 Manihot esculenta cassava26784.m1 N 0.900
cassava42388.valid.m1 Manihot esculenta cassava42388.valid.m1 N 0.883
POPTR_0002s07430 Populus trichocarpa POPTR_0002s07430 N 0.868
POPTR_0005s20890 Populus trichocarpa POPTR_0005s20890 N 0.859
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N 0.857
SapurV1A.0267s0240 Salix purpurea SapurV1A.0267s0240 N 0.854
chr1.CM0982.460.nd Lotus japonicus chr1.CM0982.460.nd N 0.850
TCM_035362 Theobroma cacao TCM_035362 N 0.837
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N 0.832
Ciclev10000671m.g Citrus clementina Ciclev10000671m.g N 0.832
orange1.1g007853m.g Citrus sinensis orange1.1g007853m.g N 0.832
Lus10042776.g Linum usitatissimum Lus10042776.g N 0.827
Lus10029747.g Linum usitatissimum Lus10029747.g N 0.824
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N 0.817
gene01015-v1.0-hybrid Fragaria vesca gene01015-v1.0-hybrid N 0.811
MDP0000859087 Malus domestica MDP0000859087 N 0.810
MDP0000727836 Malus domestica MDP0000727836 N 0.810
evm.TU.supercontig_26.96 Carica papaya evm.TU.supercontig_26.96 N 0.809
PK29476.1 Cannabis sativa PK29476.1 N 0.805
PRUPE_ppa003310mg Prunus persica PRUPE_ppa003310mg N 0.805
GLYMA06G12701 Glycine max GLYMA06G12701 N 0.805
Pm022704 Prunus mume Pm022704 N 0.802
GLYMA04G42090 Glycine max GLYMA04G42090 N 0.800
MTR_1g029420 Medicago truncatula MTR_1g029420 N 0.797
GLYMA13G09220 Glycine max GLYMA13G09220 N 0.781
MTR_3g089055 Medicago truncatula MTR_3g089055 N 0.781
Ca_03920 Cicer arietinum Ca_03920 N 0.775
VIT_04s0044g01370 Vitis vinifera VIT_04s0044g01370 N 0.772
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.770
GLYMA14G27290 Glycine max GLYMA14G27290 N 0.770
SCL1 Vitis vinifera VIT_18s0001g15270 N 0.770
SCL1 Arabidopsis lyrata fgenesh2_kg.1__2335__AT1G21450.1 N 0.768
Thhalv10007142m.g Eutrema salsugineum Thhalv10007142m.g N 0.765
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N 0.765
SCL1 Arabidopsis thaliana AT1G21450 N 0.759
Cucsa.079150 Cucumis sativus Cucsa.079150 N 0.759
PDK_20s1392371g003 Phoenix dactylifera PDK_20s1392371g003 N 0.757
Cagra.1632s0036 Capsella grandiflora Cagra.1632s0036 N 0.754
Cla015267 Citrullus lanatus Cla015267 N 0.751
Carubv10008658m.g Capsella rubella Carubv10008658m.g N 0.751
Bra017915 Brassica rapa Bra017915 N 0.751
Bostr.25570s0024 Boechera stricta Bostr.25570s0024 N 0.749
Bo5g034360 Brassica oleracea Bo5g034360 N 0.749
mgf010500m Mimulus guttatus mgf010500m N 0.743
Bo7g059410 Brassica oleracea Bo7g059410 N 0.741
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N 0.740
Bra012280 Brassica rapa Bra012280 N 0.736
PGSC0003DMG400024853 Solanum tuberosum PGSC0003DMG400024853 N 0.734
Solyc04g064550.1 Solanum lycopersicum Solyc04g064550.1 N 0.732
GSMUA_Achr3G02410_001 Musa acuminata GSMUA_Achr3G02410_001 N 0.729
AMTR_s00186p00018500 Amborella trichopoda AMTR_s00186p00018500 N 0.724
OPUNC01G38160 Oryza punctata OPUNC01G38160 N 0.702