CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAC_03196
(
Sordaria macrospora
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SMAC_03196
T128981_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01122
M01872_2.00
Neurospora crassa
NHCCCRC
GYGGGDN
PBM
Weirauch et al.(2014)
pTH8915
0.827
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC08975
C2H2 ZF
60
84
FACNYEDCNKVYSRAEHLQRHQLNH
CCC08975
C2H2 ZF
90
114
YRCDAAGCEQQFVRADLLSRHKKRH
Links
Other
C2H2 ZF
family TFs
Other
Sordaria macrospora
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Zkscan17
Mus musculus
ENSMUSG00000020472
I