CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMAC_03196
(
Sordaria macrospora
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SMAC_03196
T128981_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01122
M01872_2.00
Neurospora crassa
NHCCCRC
GYGGGDN
PBM
Weirauch et al.(2014)
pTH8915
0.827
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC08975
C2H2 ZF
60
84
FACNYEDCNKVYSRAEHLQRHQLNH
CCC08975
C2H2 ZF
90
114
YRCDAAGCEQQFVRADLLSRHKKRH
Links
Other
C2H2 ZF
family TFs
Other
Sordaria macrospora
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_76594
Neurospora tetrasperma
NEUTE1DRAFT_76594
I
0.827
estExt_Genewise1Plus.C_10156
Neurospora discreta
estExt_Genewise1Plus.C_10156
I
0.827
NCU01122
Neurospora crassa
NCU01122
D
0.827
CH063_09542
Colletotrichum higginsianum
CH063_09542
I
0.773
PODANS_2_7560
Podospora anserina
PODANS_2_7560
I
0.772
CFIO01_01047
Colletotrichum fioriniae
CFIO01_01047
I
0.768
Cob_09074
Colletotrichum orbiculare
Cob_09074
I
0.768
CSUB01_10917
Colletotrichum sublineola
CSUB01_10917
I
0.768
GLRG_09393
Colletotrichum graminicola
GLRG_09393
I
0.768
TRIATDRAFT_295810
Trichoderma atroviride
TRIATDRAFT_295810
I
0.756
TRIVIDRAFT_203114
Trichoderma virens
TRIVIDRAFT_203114
I
0.756