CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIVIDRAFT_203114
(
Trichoderma virens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TRIVIDRAFT_203114
T130837_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01122
M01872_2.00
Neurospora crassa
NHCCCRC
GYGGGDN
PBM
Weirauch et al.(2014)
pTH8915
0.756
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK20030
C2H2 ZF
55
79
FVCDHAGCEKIYSRAEHLQRHQLNH
EHK20030
C2H2 ZF
85
109
YRCDVGDCDQKFVRLDLLSRHKKRH
Links
Other
C2H2 ZF
family TFs
Other
Trichoderma virens
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRIATDRAFT_295810
Trichoderma atroviride
TRIATDRAFT_295810
I
0.827
BBA_06544
Beauveria bassiana
BBA_06544
N
0.778
VHEMI05611
Torrubiella hemipterigena
VHEMI05611
N
0.778
S40288_00525
Stachybotrys chartarum
S40288_00525
N
0.777
CSUB01_10917
Colletotrichum sublineola
CSUB01_10917
I
0.767
GLRG_09393
Colletotrichum graminicola
GLRG_09393
I
0.767
CH063_09542
Colletotrichum higginsianum
CH063_09542
I
0.762
Cob_09074
Colletotrichum orbiculare
Cob_09074
I
0.756
NEUTE1DRAFT_76594
Neurospora tetrasperma
NEUTE1DRAFT_76594
I
0.756
SMAC_03196
Sordaria macrospora
SMAC_03196
I
0.756
estExt_Genewise1Plus.C_10156
Neurospora discreta
estExt_Genewise1Plus.C_10156
I
0.756
NCU01122
Neurospora crassa
NCU01122
D
0.756