CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TPHA_0K01770
(
Tetrapisispora phaffii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TPHA_0K01770
T130515_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cre-1
M01198_2.00
Neurospora crassa
CCCCRNNN
NNNYGGGG
PBM
Lambert et al.(2019)
pTH8711
0.786
0.761
MIG1
M00026_2.00
Saccharomyces cerevisiae
HCCCCRCN
NGYGGGGD
PBM
Badis et al.(2008)
MIG1_2106
0.782
0.848
MIG1
M01532_2.00
Saccharomyces cerevisiae
NCYCCRBNNN
NNNVYGGRGN
PBM
Zhu et al.(2009)
Mig1
0.782
0.848
MIG1
M07456_2.00
Saccharomyces cerevisiae
NCCCCRS
SYGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0337.1
0.782
0.848
MIG1
M08523_2.00
Saccharomyces cerevisiae
NCCCCRS
SYGGGGN
Misc
DeBoer et al.(2011)
YGL035C_555
0.782
0.848
MIG1
M08524_2.00
Saccharomyces cerevisiae
CCCCRSWWWW
WWWWSYGGGG
Misc
DeBoer et al.(2011)
YGL035C_654
0.782
0.848
MIG1
M10391_2.00
Saccharomyces cerevisiae
NHCCCCRSDTWWWWDDM
KHHWWWWAHSYGGGGDN
Transfac
Matys et al.(2006)
F$MIG1_01
0.782
0.848
MIG1
M10392_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_03
0.782
0.848
MIG1
M10393_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_Q6
0.782
0.848
RO3G_16591
M01442_2.00
Rhizopus oryzae
NCCCCRCDNN
NNHGYGGGGN
PBM
Najafabadi et al.(2015a)
pTH10231
0.762
0.717
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCE65310
C2H2 ZF
69
91
HVCGTCGRAFHRLEHQTRHMRTH
CCE65310
C2H2 ZF
97
121
HACDFQGCTKRFSRSDELTRHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Tetrapisispora phaffii
TFs
272 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DPBF3
Arabidopsis thaliana
AT3G56850
D
PK24978.1
Cannabis sativa
PK24978.1
D
FD
Arabidopsis lyrata
Al_scaffold_0007_453
I
AMTR_s00101p00038080
Amborella trichopoda
AMTR_s00101p00038080
I
AMTR_s00114p00031980
Amborella trichopoda
AMTR_s00114p00031980
I
AMTR_s00152p00081700
Amborella trichopoda
AMTR_s00152p00081700
I
ATBZIP27
Arabidopsis thaliana
AT2G17770
I
EEL
Arabidopsis thaliana
AT2G41070
I
FD
Arabidopsis thaliana
AT4G35900
I
BGIOSGA000613
Oryza indica
BGIOSGA000613
I
BGIOSGA004837
Oryza indica
BGIOSGA004837
I
BGIOSGA010835
Oryza indica
BGIOSGA010835
I
BGIOSGA020087
Oryza indica
BGIOSGA020087
I
BGIOSGA026419
Oryza indica
BGIOSGA026419
I
Bo4g012940
Brassica oleracea
Bo4g012940
I
Bo4g112690
Brassica oleracea
Bo4g112690
I
Bo6g072380
Brassica oleracea
Bo6g072380
I
Bo8g091160
Brassica oleracea
Bo8g091160
I
Bra003253
Brassica rapa
Bra003253
I
Bra007274
Brassica rapa
Bra007274
I
Bra007276
Brassica rapa
Bra007276
I
Bra014668
Brassica rapa
Bra014668
I
Bra016953
Brassica rapa
Bra016953
I
BRADI1G17335
Brachypodium distachyon
BRADI1G17335
I
BRADI1G63840
Brachypodium distachyon
BRADI1G63840
I
BRADI2G21820
Brachypodium distachyon
BRADI2G21820
I
BRADI2G53060
Brachypodium distachyon
BRADI2G53060
I
BRADI4G43850
Brachypodium distachyon
BRADI4G43850
I
F775_17024
Aegilops tauschii
F775_17024
I
F775_28711
Aegilops tauschii
F775_28711
I
F775_31964
Aegilops tauschii
F775_31964
I
F775_32479
Aegilops tauschii
F775_32479
I
F775_43558
Aegilops tauschii
F775_43558
I
EEL
Arabidopsis lyrata
fgenesh2_kg.4__2235__AT2G41070.2
I
GLYMA03G00580
Glycine max
GLYMA03G00580
I
GLYMA04G14840
Glycine max
GLYMA04G14840
I
GLYMA05G25200
Glycine max
GLYMA05G25200
I
GLYMA06G47220
Glycine max
GLYMA06G47220
I
GLYMA08G24340
Glycine max
GLYMA08G24340
I
GLYMA15G35080
Glycine max
GLYMA15G35080
I
GLYMA19G30230
Glycine max
GLYMA19G30230
I
GRMZM2G077124
Zea mays
GRMZM2G077124
I
GRMZM2G159134
Zea mays
GRMZM2G159134
I
GRMZM2G161009
Zea mays
GRMZM2G161009
I
GRMZM2G168079
Zea mays
GRMZM2G168079
I
GSMUA_Achr11G15610_001
Musa acuminata
GSMUA_Achr11G15610_001
I
GSMUA_Achr2G20490_001
Musa acuminata
GSMUA_Achr2G20490_001
I
GSMUA_Achr3G22710_001
Musa acuminata
GSMUA_Achr3G22710_001
I
GSMUA_Achr8G07740_001
Musa acuminata
GSMUA_Achr8G07740_001
I
GSMUA_Achr8G21560_001
Musa acuminata
GSMUA_Achr8G21560_001
I
GSMUA_AchrUn_randomG12190_001
Musa acuminata
GSMUA_AchrUn_randomG12190_001
I
LPERR01G30010
Leersia perrieri
LPERR01G30010
I
LPERR01G32620
Leersia perrieri
LPERR01G32620
I
LPERR05G16840
Leersia perrieri
LPERR05G16840
I
MLOC_16096
Hordeum vulgare
MLOC_16096
I
MLOC_34679
Hordeum vulgare
MLOC_34679
I
MLOC_4554
Hordeum vulgare
MLOC_4554
I
MLOC_61490
Hordeum vulgare
MLOC_61490
I
MLOC_6534
Hordeum vulgare
MLOC_6534
I
MTR_3g010660
Medicago truncatula
MTR_3g010660
I
MTR_7g088090
Medicago truncatula
MTR_7g088090
I
MTR_8g043960
Medicago truncatula
MTR_8g043960
I
OB01G43630
Oryza brachyantha
OB01G43630
I
OB01G46760
Oryza brachyantha
OB01G46760
I
OB05G28440
Oryza brachyantha
OB05G28440
I
OB07G32300
Oryza brachyantha
OB07G32300
I
OBART01G34790
Oryza barthii
OBART01G34790
I
OBART01G37980
Oryza barthii
OBART01G37980
I
OBART05G21000
Oryza barthii
OBART05G21000
I
OBART07G26790
Oryza barthii
OBART07G26790
I
OGLUM01G38810
Oryza glumaepatula
OGLUM01G38810
I
OGLUM01G42150
Oryza glumaepatula
OGLUM01G42150
I
OGLUM03G15730
Oryza glumaepatula
OGLUM03G15730
I
OGLUM05G22240
Oryza glumaepatula
OGLUM05G22240
I
OGLUM07G26780
Oryza glumaepatula
OGLUM07G26780
I
OLONG_003399
Oryza longistaminata
OLONG_003399
I
OLONG_014546
Oryza longistaminata
OLONG_014546
I
OMERI01G32080
Oryza meridionalis
OMERI01G32080
I
OMERI01G34950
Oryza meridionalis
OMERI01G34950
I
OMERI03G14020
Oryza meridionalis
OMERI03G14020
I
OMERI05G18990
Oryza meridionalis
OMERI05G18990
I
OMERI07G23410
Oryza meridionalis
OMERI07G23410
I
ONIVA01G39770
Oryza nivara
ONIVA01G39770
I
ONIVA03G16560
Oryza nivara
ONIVA03G16560
I
ONIVA04G25730
Oryza nivara
ONIVA04G25730
I
ONIVA05G21710
Oryza nivara
ONIVA05G21710
I
ONIVA07G26520
Oryza nivara
ONIVA07G26520
I
OPUNC01G33790
Oryza punctata
OPUNC01G33790
I
OPUNC05G18710
Oryza punctata
OPUNC05G18710
I
OPUNC07G25180
Oryza punctata
OPUNC07G25180
I
ORGLA01G0286100
Oryza glaberrima
ORGLA01G0286100
I
ORGLA01G0317900
Oryza glaberrima
ORGLA01G0317900
I
ORGLA03G0149400
Oryza glaberrima
ORGLA03G0149400
I
ORUFI01G38120
Oryza rufipogon
ORUFI01G38120
I
ORUFI01G41310
Oryza rufipogon
ORUFI01G41310
I
ORUFI05G22290
Oryza rufipogon
ORUFI05G22290
I
ORUFI07G27740
Oryza rufipogon
ORUFI07G27740
I
OS01G0813100
Oryza sativa
OS01G0813100
I
OS01G0859300
Oryza sativa
OS01G0859300
I
OS03G0322700
Oryza sativa
OS03G0322700
I
OS05G0489700
Oryza sativa
OS05G0489700
I
OS07G0686100
Oryza sativa
OS07G0686100
I
PGSC0003DMG400007208
Solanum tuberosum
PGSC0003DMG400007208
I
PGSC0003DMG400028121
Solanum tuberosum
PGSC0003DMG400028121
I
PGSC0003DMG400029774
Solanum tuberosum
PGSC0003DMG400029774
I
POPTR_0008s01130
Populus trichocarpa
POPTR_0008s01130
I
POPTR_0009s16610
Populus trichocarpa
POPTR_0009s16610
I
POPTR_0010s25440
Populus trichocarpa
POPTR_0010s25440
I
POPTR_0010s25460
Populus trichocarpa
POPTR_0010s25460
I
PRUPE_ppa006503mg
Prunus persica
PRUPE_ppa006503mg
I
PRUPE_ppa008716mg
Prunus persica
PRUPE_ppa008716mg
I
PRUPE_ppa025544mg
Prunus persica
PRUPE_ppa025544mg
I
Sb01g036810
Sorghum bicolor
Sb01g036810
I
Sb02g043620
Sorghum bicolor
Sb02g043620
I
Sb03g037740
Sorghum bicolor
Sb03g037740
I
Sb03g040510
Sorghum bicolor
Sb03g040510
I
Sb09g023920
Sorghum bicolor
Sb09g023920
I
AREB3
Arabidopsis lyrata
scaffold_502836.1
I
SELMODRAFT_227594
Selaginella moellendorffii
SELMODRAFT_227594
I
SELMODRAFT_266892
Selaginella moellendorffii
SELMODRAFT_266892
I
SELMODRAFT_443424
Selaginella moellendorffii
SELMODRAFT_443424
I
SELMODRAFT_451399
Selaginella moellendorffii
SELMODRAFT_451399
I
SELMODRAFT_91900
Selaginella moellendorffii
SELMODRAFT_91900
I
SELMODRAFT_94516
Selaginella moellendorffii
SELMODRAFT_94516
I
Si001731m.g
Setaria italica
Si001731m.g
I
Si002173m.g
Setaria italica
Si002173m.g
I
Si022639m.g
Setaria italica
Si022639m.g
I
Solyc01g104650.2
Solanum lycopersicum
Solyc01g104650.2
I
Solyc10g081350.1
Solanum lycopersicum
Solyc10g081350.1
I
TCM_044596
Theobroma cacao
TCM_044596
I
Traes_1AL_1FFBFB058
Triticum aestivum
Traes_1AL_1FFBFB058
I
Traes_1BL_DE2CF9613
Triticum aestivum
Traes_1BL_DE2CF9613
I
Traes_1DL_D9BA83221
Triticum aestivum
Traes_1DL_D9BA83221
I
Traes_3AL_58F294736
Triticum aestivum
Traes_3AL_58F294736
I
Traes_3AL_FC5523394
Triticum aestivum
Traes_3AL_FC5523394
I
TRAES3BF001900070CFD_g
Triticum aestivum
TRAES3BF001900070CFD_g
I
TRAES3BF099600130CFD_g
Triticum aestivum
TRAES3BF099600130CFD_g
I
TRAES3BF111600130CFD_g
Triticum aestivum
TRAES3BF111600130CFD_g
I
TRAES3BF111600160CFD_g
Triticum aestivum
TRAES3BF111600160CFD_g
I
Traes_3DL_20ED2EA4C
Triticum aestivum
Traes_3DL_20ED2EA4C
I
Traes_4AS_F9C171219
Triticum aestivum
Traes_4AS_F9C171219
I
Traes_4BL_4C9A415F3
Triticum aestivum
Traes_4BL_4C9A415F3
I
Traes_4DL_F38ED7FB6
Triticum aestivum
Traes_4DL_F38ED7FB6
I
Traes_5BL_FB4EDEA83
Triticum aestivum
Traes_5BL_FB4EDEA83
I
Traes_5DL_73CE92096
Triticum aestivum
Traes_5DL_73CE92096
I
TRIUR3_06726
Triticum urartu
TRIUR3_06726
I
TRIUR3_12792
Triticum urartu
TRIUR3_12792
I
TRIUR3_15490
Triticum urartu
TRIUR3_15490
I
TRIUR3_21253
Triticum urartu
TRIUR3_21253
I
TRIUR3_24203
Triticum urartu
TRIUR3_24203
I
TRIUR3_29638
Triticum urartu
TRIUR3_29638
I
TRIUR3_31111
Triticum urartu
TRIUR3_31111
I
DPBF2
Vitis vinifera
VIT_06s0080g00340
I
VIT_12s0055g00420
Vitis vinifera
VIT_12s0055g00420
I
VIT_13s0175g00120
Vitis vinifera
VIT_13s0175g00120
I
Ca_08143
Cicer arietinum
Ca_08143
I
Ca_15706
Cicer arietinum
Ca_15706
I
Ca_23748
Cicer arietinum
Ca_23748
I
Cla009066
Citrullus lanatus
Cla009066
I
Cla013878
Citrullus lanatus
Cla013878
I
Pm001315
Prunus mume
Pm001315
I
Pm004043
Prunus mume
Pm004043
I
Pm016826
Prunus mume
Pm016826
I
29625.m000702
Ricinus communis
29625.m000702
I
29955.m001177
Ricinus communis
29955.m001177
I
30055.m001548
Ricinus communis
30055.m001548
I
30226.m002055
Ricinus communis
30226.m002055
I
cassava11518.m1
Manihot esculenta
cassava11518.m1
I
cassava16074.m1
Manihot esculenta
cassava16074.m1
I
cassava17300.m1
Manihot esculenta
cassava17300.m1
I
cassava22423.valid.m1
Manihot esculenta
cassava22423.valid.m1
I
Cucsa.184670
Cucumis sativus
Cucsa.184670
I
Cucsa.364380
Cucumis sativus
Cucsa.364380
I
Cucsa.385090
Cucumis sativus
Cucsa.385090
I
mgf002556m
Mimulus guttatus
mgf002556m
I
mgf011003m
Mimulus guttatus
mgf011003m
I
Aquca_009_00009
Aquilegia coerulea
Aquca_009_00009
I
Aquca_023_00151
Aquilegia coerulea
Aquca_023_00151
I
Aquca_072_00142
Aquilegia coerulea
Aquca_072_00142
I
Bostr.12302s0127
Boechera stricta
Bostr.12302s0127
I
Bostr.20505s0068
Boechera stricta
Bostr.20505s0068
I
Bostr.9345s0024
Boechera stricta
Bostr.9345s0024
I
Cagra.0578s0014
Capsella grandiflora
Cagra.0578s0014
I
Cagra.1642s0072
Capsella grandiflora
Cagra.1642s0072
I
Carubv10018770m.g
Capsella rubella
Carubv10018770m.g
I
Carubv10023893m.g
Capsella rubella
Carubv10023893m.g
I
Ciclev10001893m.g
Citrus clementina
Ciclev10001893m.g
I
Ciclev10002029m.g
Citrus clementina
Ciclev10002029m.g
I
Ciclev10012205m.g
Citrus clementina
Ciclev10012205m.g
I
Ciclev10028635m.g
Citrus clementina
Ciclev10028635m.g
I
Eucgr.G00615
Eucalyptus grandis
Eucgr.G00615
I
Eucgr.J00320
Eucalyptus grandis
Eucgr.J00320
I
Eucgr.K01706
Eucalyptus grandis
Eucgr.K01706
I
evm.TU.supercontig_33.182
Carica papaya
evm.TU.supercontig_33.182
I
gene00393-v1.0-hybrid
Fragaria vesca
gene00393-v1.0-hybrid
I
Gorai.005G259700
Gossypium raimondii
Gorai.005G259700
I
Gorai.009G301200
Gossypium raimondii
Gorai.009G301200
I
Gorai.009G301400
Gossypium raimondii
Gorai.009G301400
I
Lus10008927.g
Linum usitatissimum
Lus10008927.g
I
Lus10009755.g
Linum usitatissimum
Lus10009755.g
I
Lus10028889.g
Linum usitatissimum
Lus10028889.g
I
MDP0000215106
Malus domestica
MDP0000215106
I
MDP0000273211
Malus domestica
MDP0000273211
I
MDP0000740787
Malus domestica
MDP0000740787
I
orange1.1g020697m.g
Citrus sinensis
orange1.1g020697m.g
I
orange1.1g021146m.g
Citrus sinensis
orange1.1g021146m.g
I
orange1.1g037676m.g
Citrus sinensis
orange1.1g037676m.g
I
Pavir.Ba00263
Panicum virgatum
Pavir.Ba00263
I
Pavir.Bb03699
Panicum virgatum
Pavir.Bb03699
I
Pavir.Eb03523
Panicum virgatum
Pavir.Eb03523
I
Pavir.Ib01001
Panicum virgatum
Pavir.Ib01001
I
Pavir.J05672
Panicum virgatum
Pavir.J05672
I
Pavir.J34085
Panicum virgatum
Pavir.J34085
I
Pavir.J35078
Panicum virgatum
Pavir.J35078
I
Pavir.J38875
Panicum virgatum
Pavir.J38875
I
SapurV1A.0036s0930
Salix purpurea
SapurV1A.0036s0930
I
SapurV1A.0036s0950
Salix purpurea
SapurV1A.0036s0950
I
SapurV1A.0070s0720
Salix purpurea
SapurV1A.0070s0720
I
SapurV1A.0374s0070
Salix purpurea
SapurV1A.0374s0070
I
Thhalv10006121m.g
Eutrema salsugineum
Thhalv10006121m.g
I
Thhalv10017050m.g
Eutrema salsugineum
Thhalv10017050m.g
I
chr4.CM0337.330.nc
Lotus japonicus
chr4.CM0337.330.nc
I
LjSGA_023611.1
Lotus japonicus
LjSGA_023611.1
I