CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK24978.1
(
Cannabis sativa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
PK24978.1
T072904_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK24978.1
M01162_2.00
Cannabis sativa
NNNCACGTRTHNNNN
NNNNDAYACGTGNNN
PBM
Lambert et al.(2019)
pTH10153
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.788
0.581
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM
KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.788
0.581
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.788
0.581
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.788
0.581
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.788
0.581
For this family, TFs with SR scores >
0.782
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01162_2.00
bZIP
52
113
SGDRRNKRMIKNRESAARSRARKQAYTNELELVVAQLSEENERLRRRQNQINEEAAAAADKL
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK24978.1
bZIP
224
285
SGDRRNKRMIKNRESAARSRARKQAYTNELELVVAQLSEENERLRRRQNQINEEAAAAADKL
Links
Other
bZIP
family TFs
Other
Cannabis sativa
TFs
170 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_2BL_D0D6F6846
Triticum aestivum
Traes_2BL_D0D6F6846
I
0.818
gene14556-v1.0-hybrid
Fragaria vesca
gene14556-v1.0-hybrid
I
0.808
OBART01G37980
Oryza barthii
OBART01G37980
I
0.807
OGLUM01G42150
Oryza glumaepatula
OGLUM01G42150
I
0.807
ORUFI01G41310
Oryza rufipogon
ORUFI01G41310
I
0.807
ONIVA04G25730
Oryza nivara
ONIVA04G25730
I
0.807
chr2.CM0695.170.nc
Lotus japonicus
chr2.CM0695.170.nc
I
0.806
TCM_000152
Theobroma cacao
TCM_000152
I
0.805
SELMODRAFT_451399
Selaginella moellendorffii
SELMODRAFT_451399
I
0.803
Cla009066
Citrullus lanatus
Cla009066
I
0.803
SELMODRAFT_227594
Selaginella moellendorffii
SELMODRAFT_227594
I
0.803
Gorai.007G191800
Gossypium raimondii
Gorai.007G191800
I
0.803
orange1.1g021624m.g
Citrus sinensis
orange1.1g021624m.g
I
0.802
Cla022926
Citrullus lanatus
Cla022926
I
0.796
Cucsa.396070
Cucumis sativus
Cucsa.396070
I
0.796
SapurV1A.0016s1330
Salix purpurea
SapurV1A.0016s1330
I
0.795
GSMUA_Achr11G15610_001
Musa acuminata
GSMUA_Achr11G15610_001
I
0.795
Traes_5BL_FB4EDEA83
Triticum aestivum
Traes_5BL_FB4EDEA83
I
0.795
MLOC_4554
Hordeum vulgare
MLOC_4554
I
0.795
BRADI2G53060
Brachypodium distachyon
BRADI2G53060
I
0.795
Traes_5DL_73CE92096
Triticum aestivum
Traes_5DL_73CE92096
I
0.795
F775_17024
Aegilops tauschii
F775_17024
I
0.795
SapurV1A.0025s0010
Salix purpurea
SapurV1A.0025s0010
I
0.795
GSMUA_AchrUn_randomG12190_001
Musa acuminata
GSMUA_AchrUn_randomG12190_001
I
0.794
Sb01g036810
Sorghum bicolor
Sb01g036810
I
0.794
Pavir.Ib01001
Panicum virgatum
Pavir.Ib01001
I
0.794
MLOC_16096
Hordeum vulgare
MLOC_16096
I
0.793
TRIUR3_24203
Triticum urartu
TRIUR3_24203
I
0.793
F775_28711
Aegilops tauschii
F775_28711
I
0.793
BZIP27
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3003160
I
0.793
Cucsa.184670
Cucumis sativus
Cucsa.184670
I
0.793
TRAES3BF001900070CFD_g
Triticum aestivum
TRAES3BF001900070CFD_g
I
0.793
Bostr.12302s0127
Boechera stricta
Bostr.12302s0127
I
0.792
SapurV1A.0374s0070
Salix purpurea
SapurV1A.0374s0070
I
0.792
POPTR_0009s16610
Populus trichocarpa
POPTR_0009s16610
I
0.792
FD
Arabidopsis lyrata
Al_scaffold_0007_453
I
0.791
Sb09g023920
Sorghum bicolor
Sb09g023920
I
0.791
Si001731m.g
Setaria italica
Si001731m.g
I
0.791
GRMZM2G161009
Zea mays
GRMZM2G161009
I
0.791
FD
Arabidopsis thaliana
AT4G35900
I
0.791
Cla013878
Citrullus lanatus
Cla013878
I
0.790
BRADI3G38200
Brachypodium distachyon
BRADI3G38200
I
0.790
30055.m001548
Ricinus communis
30055.m001548
I
0.790
cassava16074.m1
Manihot esculenta
cassava16074.m1
I
0.790
BRADI4G43850
Brachypodium distachyon
BRADI4G43850
I
0.790
VIT_12s0055g00420
Vitis vinifera
VIT_12s0055g00420
I
0.790
GLYMA08G24340
Glycine max
GLYMA08G24340
I
0.789
DPBF3
Arabidopsis thaliana
AT3G56850
D
0.788
Pm016826
Prunus mume
Pm016826
I
0.788
Solyc10g081350.1
Solanum lycopersicum
Solyc10g081350.1
I
0.788
SapurV1A.0036s0930
Salix purpurea
SapurV1A.0036s0930
I
0.788
Si002173m.g
Setaria italica
Si002173m.g
I
0.788
SapurV1A.0036s0950
Salix purpurea
SapurV1A.0036s0950
I
0.788
LPERR01G30010
Leersia perrieri
LPERR01G30010
I
0.788
TCM_044596
Theobroma cacao
TCM_044596
I
0.788
GLYMA15G35080
Glycine max
GLYMA15G35080
I
0.788
GLYMA19G30230
Glycine max
GLYMA19G30230
I
0.788
Pavir.J38875
Panicum virgatum
Pavir.J38875
I
0.788
VIT_13s0175g00120
Vitis vinifera
VIT_13s0175g00120
I
0.788
orange1.1g020697m.g
Citrus sinensis
orange1.1g020697m.g
I
0.788
Ca_08143
Cicer arietinum
Ca_08143
I
0.788
GLYMA03G00580
Glycine max
GLYMA03G00580
I
0.788
F775_31964
Aegilops tauschii
F775_31964
I
0.788
Gorai.005G102300
Gossypium raimondii
Gorai.005G102300
I
0.788
gene00393-v1.0-hybrid
Fragaria vesca
gene00393-v1.0-hybrid
I
0.788
orange1.1g021146m.g
Citrus sinensis
orange1.1g021146m.g
I
0.788
Eucgr.J00320
Eucalyptus grandis
Eucgr.J00320
I
0.788
BGIOSGA020087
Oryza indica
BGIOSGA020087
I
0.788
Gorai.009G301200
Gossypium raimondii
Gorai.009G301200
I
0.788
Lus10028889.g
Linum usitatissimum
Lus10028889.g
I
0.788
Lus10008927.g
Linum usitatissimum
Lus10008927.g
I
0.788
Gorai.009G301400
Gossypium raimondii
Gorai.009G301400
I
0.788
BGIOSGA010835
Oryza indica
BGIOSGA010835
I
0.788
Pavir.Ba00263
Panicum virgatum
Pavir.Ba00263
I
0.788
Aquca_072_00142
Aquilegia coerulea
Aquca_072_00142
I
0.788
mgf011003m
Mimulus guttatus
mgf011003m
I
0.788
Cucsa.364380
Cucumis sativus
Cucsa.364380
I
0.788
LPERR05G16840
Leersia perrieri
LPERR05G16840
I
0.788
Bostr.20505s0068
Boechera stricta
Bostr.20505s0068
I
0.788
Cagra.0578s0014
Capsella grandiflora
Cagra.0578s0014
I
0.788
Carubv10018770m.g
Capsella rubella
Carubv10018770m.g
I
0.788
Pavir.Bb03699
Panicum virgatum
Pavir.Bb03699
I
0.788
Pavir.Eb03523
Panicum virgatum
Pavir.Eb03523
I
0.788
cassava22423.valid.m1
Manihot esculenta
cassava22423.valid.m1
I
0.788
Traes_1DL_D9BA83221
Triticum aestivum
Traes_1DL_D9BA83221
I
0.788
POPTR_0008s01130
Populus trichocarpa
POPTR_0008s01130
I
0.788
PGSC0003DMG400028121
Solanum tuberosum
PGSC0003DMG400028121
I
0.788
POPTR_0010s25440
Populus trichocarpa
POPTR_0010s25440
I
0.788
POPTR_0010s25460
Populus trichocarpa
POPTR_0010s25460
I
0.788
OB05G28440
Oryza brachyantha
OB05G28440
I
0.788
PRUPE_ppa008716mg
Prunus persica
PRUPE_ppa008716mg
I
0.788
ONIVA03G16560
Oryza nivara
ONIVA03G16560
I
0.788
OBART05G21000
Oryza barthii
OBART05G21000
I
0.788
OPUNC01G33790
Oryza punctata
OPUNC01G33790
I
0.788
OPUNC05G18710
Oryza punctata
OPUNC05G18710
I
0.788
ORUFI05G22290
Oryza rufipogon
ORUFI05G22290
I
0.788
ONIVA05G21710
Oryza nivara
ONIVA05G21710
I
0.788
OS05G0489700
Oryza sativa
OS05G0489700
I
0.788
OMERI03G14020
Oryza meridionalis
OMERI03G14020
I
0.788
OMERI05G18990
Oryza meridionalis
OMERI05G18990
I
0.788
AREB3
Arabidopsis lyrata
scaffold_502836.1
I
0.788
Sb03g040510
Sorghum bicolor
Sb03g040510
I
0.788
Thhalv10006121m.g
Eutrema salsugineum
Thhalv10006121m.g
I
0.788
MTR_7g088090
Medicago truncatula
MTR_7g088090
I
0.788
MLOC_6534
Hordeum vulgare
MLOC_6534
I
0.788
SapurV1A.0070s0720
Salix purpurea
SapurV1A.0070s0720
I
0.788
OGLUM05G22240
Oryza glumaepatula
OGLUM05G22240
I
0.788
OGLUM03G15730
Oryza glumaepatula
OGLUM03G15730
I
0.788
OLONG_003399
Oryza longistaminata
OLONG_003399
I
0.788
OPUNC07G25180
Oryza punctata
OPUNC07G25180
I
0.787
BGIOSGA000613
Oryza indica
BGIOSGA000613
I
0.787
ONIVA07G26520
Oryza nivara
ONIVA07G26520
I
0.787
Eucgr.K01706
Eucalyptus grandis
Eucgr.K01706
I
0.787
MDP0000273211
Malus domestica
MDP0000273211
I
0.787
OMERI07G23410
Oryza meridionalis
OMERI07G23410
I
0.787
Ciclev10012205m.g
Citrus clementina
Ciclev10012205m.g
I
0.787
Ciclev10001893m.g
Citrus clementina
Ciclev10001893m.g
I
0.787
BGIOSGA026419
Oryza indica
BGIOSGA026419
I
0.787
OBART07G26790
Oryza barthii
OBART07G26790
I
0.787
MDP0000215106
Malus domestica
MDP0000215106
I
0.787
OGLUM07G26780
Oryza glumaepatula
OGLUM07G26780
I
0.787
ORUFI07G27740
Oryza rufipogon
ORUFI07G27740
I
0.787
OB07G32300
Oryza brachyantha
OB07G32300
I
0.787
Traes_3AL_58F294736
Triticum aestivum
Traes_3AL_58F294736
I
0.787
Traes_3DL_20ED2EA4C
Triticum aestivum
Traes_3DL_20ED2EA4C
I
0.787
Sb02g043620
Sorghum bicolor
Sb02g043620
I
0.787
TRIUR3_06726
Triticum urartu
TRIUR3_06726
I
0.787
TRIUR3_12792
Triticum urartu
TRIUR3_12792
I
0.787
GRMZM2G077124
Zea mays
GRMZM2G077124
I
0.787
OS07G0686100
Oryza sativa
OS07G0686100
I
0.787
Traes_1BL_DE2CF9613
Triticum aestivum
Traes_1BL_DE2CF9613
I
0.787
ORGLA03G0149400
Oryza glaberrima
ORGLA03G0149400
I
0.787
OS01G0813100
Oryza sativa
OS01G0813100
I
0.787
GSMUA_Achr8G21560_001
Musa acuminata
GSMUA_Achr8G21560_001
I
0.787
SELMODRAFT_94516
Selaginella moellendorffii
SELMODRAFT_94516
I
0.787
SELMODRAFT_91900
Selaginella moellendorffii
SELMODRAFT_91900
I
0.787
Traes_1AL_1FFBFB058
Triticum aestivum
Traes_1AL_1FFBFB058
I
0.787
OLONG_002030
Oryza longistaminata
OLONG_002030
I
0.786
OB01G43630
Oryza brachyantha
OB01G43630
I
0.786
OGLUM01G38810
Oryza glumaepatula
OGLUM01G38810
I
0.786
ORUFI01G38120
Oryza rufipogon
ORUFI01G38120
I
0.786
ORGLA01G0286100
Oryza glaberrima
ORGLA01G0286100
I
0.786
Pavir.J05672
Panicum virgatum
Pavir.J05672
I
0.786
OBART01G34790
Oryza barthii
OBART01G34790
I
0.786
AMTR_s00101p00038080
Amborella trichopoda
AMTR_s00101p00038080
I
0.786
Pavir.J34085
Panicum virgatum
Pavir.J34085
I
0.786
TRIUR3_31111
Triticum urartu
TRIUR3_31111
I
0.786
ONIVA01G39770
Oryza nivara
ONIVA01G39770
I
0.786
OMERI01G32080
Oryza meridionalis
OMERI01G32080
I
0.786
TRIUR3_29638
Triticum urartu
TRIUR3_29638
I
0.785
30226.m002055
Ricinus communis
30226.m002055
I
0.785
Solyc02g083520.2
Solanum lycopersicum
Solyc02g083520.2
I
0.785
Carubv10009177m.g
Capsella rubella
Carubv10009177m.g
I
0.784
Cagra.10917s0002
Capsella grandiflora
Cagra.10917s0002
I
0.784
cassava17300.m1
Manihot esculenta
cassava17300.m1
I
0.784
Carubv10006580m.g
Capsella rubella
Carubv10006580m.g
I
0.784
Si022639m.g
Setaria italica
Si022639m.g
I
0.784
29955.m001177
Ricinus communis
29955.m001177
I
0.783
SELMODRAFT_177659
Selaginella moellendorffii
SELMODRAFT_177659
I
0.783
Aquca_023_00151
Aquilegia coerulea
Aquca_023_00151
I
0.783
Eucgr.G00615
Eucalyptus grandis
Eucgr.G00615
I
0.783
orange1.1g037676m.g
Citrus sinensis
orange1.1g037676m.g
I
0.783
orange1.1g025340m.g
Citrus sinensis
orange1.1g025340m.g
I
0.783
Ciclev10001159m.g
Citrus clementina
Ciclev10001159m.g
I
0.783
evm.TU.supercontig_49.26
Carica papaya
evm.TU.supercontig_49.26
I
0.782
PGSC0003DMG400008011
Solanum tuberosum
PGSC0003DMG400008011
I
0.782
AMTR_s00132p00065700
Amborella trichopoda
AMTR_s00132p00065700
I
0.782
SELMODRAFT_266892
Selaginella moellendorffii
SELMODRAFT_266892
I
0.782
mgf015092m
Mimulus guttatus
mgf015092m
I
0.782
MDP0000740787
Malus domestica
MDP0000740787
I
0.782