CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_001539264.1
(
Histoplasma capsulatum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
XP_001539264.1
T131789_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
XP_001539264.1
M01472_2.00
Histoplasma capsulatum
MCCCCACYYH
DRRGTGGGGK
PBM
Najafabadi et al.(2015a)
pTH11150
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01472_2.00
C2H2 ZF
24
48
HVCSHPGCNKRFTRAEHLRRHALNH
M01472_2.00
C2H2 ZF
54
75
TCERCGVHFNRPDLLGRHMARH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_001539264.1
C2H2 ZF
24
48
HVCSHPGCNKRFTRAEHLRRHALNH
XP_001539264.1
C2H2 ZF
54
75
TCERCGVHFNRPDLLGRHMARH
Links
Other
C2H2 ZF
family TFs
Other
Histoplasma capsulatum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA022967
Oryza indica
BGIOSGA022967
N
0.000
BRADI1G42440
Brachypodium distachyon
BRADI1G42440
N
0.000
F775_02947
Aegilops tauschii
F775_02947
N
0.000
MLOC_37511
Hordeum vulgare
MLOC_37511
N
0.000
OB0081G10010
Oryza brachyantha
OB0081G10010
N
0.000
OMERI06G16990
Oryza meridionalis
OMERI06G16990
N
0.000
ONIVA06G18720
Oryza nivara
ONIVA06G18720
N
0.000
OPUNC06G14520
Oryza punctata
OPUNC06G14520
N
0.000
ORGLA06G0131200
Oryza glaberrima
ORGLA06G0131200
N
0.000
SELMODRAFT_418491
Selaginella moellendorffii
SELMODRAFT_418491
N
0.000
SELMODRAFT_423809
Selaginella moellendorffii
SELMODRAFT_423809
N
0.000
Traes_7BS_A0A8B25DF
Triticum aestivum
Traes_7BS_A0A8B25DF
N
0.000
Traes_7DS_4053B6E88
Triticum aestivum
Traes_7DS_4053B6E88
N
0.000
TRIUR3_14379
Triticum urartu
TRIUR3_14379
N
0.000
Pavir.Db01008
Panicum virgatum
Pavir.Db01008
N
0.000