Alligator_sinensis_CCG012951.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG012951.1 T133298_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WT1
M00249_2.00 		Homo sapiens
NCYCCCCCVNN
NNBGGGGGRGN		 PBM
Barrera et al.(2016)
WT1_REF 		0.827 1.000
WT1
M08937_2.00 		Homo sapiens
YYYCBBYYCCTCCYYCNCBY
RVGNGRRGGAGGRRVVGRRR		 Misc
Kulakovskiy et al.(2013)
WT1_HUMAN.H11MO.0.C 		0.827 1.000
Wt1
M08968_2.00 		Mus musculus
YYYCBBYYCCTCCYYCNCBY
RVGNGRRGGAGGRRVVGRRR		 Misc
Kulakovskiy et al.(2013)
WT1_MOUSE.H11MO.0.B 		0.827 1.000
Wt1
M10337_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$WT1_02 		0.827 1.000
WT1
M10290_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$WT1_Q4 		0.827 1.000
WT1
M10291_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$WT1_Q6_01 		0.827 1.000
WT1
M10292_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$WT1_Q6_02 		0.827 1.000
WT1
M10293_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$WT1_Q6 		0.827 1.000
WT1
M00244_2.00 		Homo sapiens
NNNWAMWATATN
NATATWKTWNNN		 PBM
Barrera et al.(2016)
WT1_H373Y 		0.827 0.989
WT1
M00245_2.00 		Homo sapiens
NNNNNNN
NNNNNNN		 PBM
Barrera et al.(2016)
WT1_R366C 		0.826 0.989
WT1
M00246_2.00 		Homo sapiens
NNNNNNN
NNNNNNN		 PBM
Barrera et al.(2016)
WT1_R366L 		0.826 0.989
WT1
M00247_2.00 		Homo sapiens
NWATATDAHNN
NNDTHATATWN		 PBM
Barrera et al.(2016)
WT1_R394L 		0.826 0.989
WT1
M00248_2.00 		Homo sapiens
NNTATTWTATNNN
NNNATAWAATANN		 PBM
Barrera et al.(2016)
WT1_R394W 		0.826 0.989
WT1
M00243_2.00 		Homo sapiens
NNNNNNN
NNNNNNN		 PBM
Barrera et al.(2016)
WT1_F392L 		0.820 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG012951.1 C2H2 ZF 207 231
Alligator_sinensis_CCG012951.1 C2H2 ZF 237 261
Alligator_sinensis_CCG012951.1 C2H2 ZF 267 289
Alligator_sinensis_CCG012951.1 C2H2 ZF 295 319

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WT1 Homo sapiens ENSG00000184937 D 0.827
Wt1 Mus musculus ENSMUSG00000016458 D 0.827
ENSPMAG00000008950 Petromyzon marinus ENSPMAG00000008950 I 0.807
ENSSTOG00000023716 Ictidomys tridecemlineatus ENSSTOG00000023716 I 0.827
WT1 Sus scrofa ENSSSCG00000013316 I 0.827
ENSSHAG00000017390 Sarcophilus harrisii ENSSHAG00000017390 I 0.827
ENSSARG00000000207 Sorex araneus ENSSARG00000000207 I 0.827
Wt1 Rattus norvegicus ENSRNOG00000013074 I 0.827
WT1 Pan troglodytes ENSPTRG00000003476 I 0.827
ENSPSIG00000013679 Pelodiscus sinensis ENSPSIG00000013679 I 0.827
ENSPPYG00000029822 Pongo abelii ENSPPYG00000029822 I 0.827
WT1 Taeniopygia guttata ENSTGUG00000004906 I 0.827
ENSPFOG00000010572 Poecilia formosa ENSPFOG00000010572 I 0.783
WT1 Procavia capensis ENSPCAG00000002213 I 0.812
ENSPANG00000019482 Papio anubis ENSPANG00000019482 I 0.827
wt1 Oryzias latipes ENSORLG00000012424 I 0.793
wt1 Oryzias latipes ENSORLG00000009859 I 0.787
ENSOPRG00000015709 Ochotona princeps ENSOPRG00000015709 I 0.827
ENSONIG00000011043 Oreochromis niloticus ENSONIG00000011043 I 0.807
ENSONIG00000005545 Oreochromis niloticus ENSONIG00000005545 I 0.793
Gfo_R001970 Geospiza fortis Gfo_R001970 I 0.827
wt1.S Xenopus laevis XB-GENE-864792 I 0.827
wt1.L Xenopus laevis XB-GENE-6252376 I 0.827
wt1 Xenopus tropicalis XB-GENE-484999 I 0.827
B7ZSG3 Xenopus laevis B7ZSG3 I 0.827
B5DE03 Xenopus tropicalis B5DE03 I 0.827
fgenesh2_pm.scaffold_110000013 Branchiostoma floridae fgenesh2_pm.scaffold_110000013 I 0.758
fgenesh2_pg.scaffold_80000039 Branchiostoma floridae fgenesh2_pg.scaffold_80000039 I 0.758
Pvit_09510 Pogona vitticeps Pvit_09510 I 0.825
WT1 Oryctolagus cuniculus ENSOCUG00000005882 I 0.827
ENSP00000331327 Macaca fascicularis ENSP00000331327 I 0.827
ENSP00000331327-D1 Bos grunniens ENSP00000331327-D1 I 0.827
Afo_R014628 Aptenodytes forsteri Afo_R014628 I 0.827
Aan_R006616 Calypte anna Aan_R006616 I 0.827
ENSXMAG00000005139 Xiphophorus maculatus ENSXMAG00000005139 I 0.783
ENSVPAG00000007788 Vicugna pacos ENSVPAG00000007788 I 0.827
wt1b Takifugu rubripes ENSTRUG00000006559 I 0.763
wt1b Tetraodon nigroviridis ENSTNIG00000013806 I 0.760
wt1b Danio rerio ENSDARG00000007990 I 0.790
WT1 Felis catus ENSFCAG00000000308 I 0.827
ENSFALG00000010820 Ficedula albicollis ENSFALG00000010820 I 0.827
WT1 Echinops telfairi ENSETEG00000000684 I 0.827
ENSEEUG00000007221 Erinaceus europaeus ENSEEUG00000007221 I 0.827
ENSECAG00000022308 Equus caballus ENSECAG00000022308 I 0.827
Wt1 Dipodomys ordii ENSDORG00000013725 I 0.827
WT1 Dasypus novemcinctus ENSDNOG00000003652 I 0.827
wt1a Danio rerio ENSDARG00000031420 I 0.810
wt1b Gasterosteus aculeatus ENSGACG00000016020 I 0.790
ENSCSAG00000005257 Chlorocebus sabaeus ENSCSAG00000005257 I 0.827
WT1 Callithrix jacchus ENSCJAG00000005900 I 0.827
WT1 Choloepus hoffmanni ENSCHOG00000006244 I 0.827
WT1 Canis familiaris ENSCAFG00000007426 I 0.827
WT1 Bos taurus ENSBTAG00000047268 I 0.827
ENSAPLG00000005775 Anas platyrhynchos ENSAPLG00000005775 I 0.827
ENSAMXG00000013017 Astyanax mexicanus ENSAMXG00000013017 I 0.810
ENSAMEG00000006957 Ailuropoda melanoleuca ENSAMEG00000006957 I 0.827
WT1 Microcebus murinus ENSMICG00000004097 I 0.827
ENSACAG00000002480 Anolis carolinensis ENSACAG00000002480 I 0.825
ENSOARG00000016334 Ovis aries ENSOARG00000016334 I 0.827
ENSOANG00000015147 Ornithorhynchus anatinus ENSOANG00000015147 I 0.827
ENSNLEG00000017890 Nomascus leucogenys ENSNLEG00000017890 I 0.827
ENSMPUG00000011307 Mustela putorius furo ENSMPUG00000011307 I 0.827
WT1 Monodelphis domestica ENSMODG00000009646 I 0.827
WT1 Macaca mulatta ENSMMUG00000009881 I 0.827
WT1 Myotis lucifugus ENSMLUG00000027523 I 0.827
WT1 Otolemur garnettii ENSOGAG00000007118 I 0.827
ENSMGAG00000001489 Meleagris gallopavo ENSMGAG00000001489 I 0.827
ENSLOCG00000004537 Lepisosteus oculatus ENSLOCG00000004537 I 0.810
WT1 Loxodonta africana ENSLAFG00000006160 I 0.827
ENSLACG00000016378 Latimeria chalumnae ENSLACG00000016378 I 0.824
ENSGMOG00000012296 Gadus morhua ENSGMOG00000012296 I 0.795
WT1 Gorilla gorilla ENSGGOG00000011586 I 0.827
WT1 Gallus gallus ENSGALG00000012115 I 0.827