Alligator_sinensis_CCG016667.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG016667.1 T133357_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG016667.1 C2H2 ZF 929 953
Alligator_sinensis_CCG016667.1 C2H2 ZF 1001 1023

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRERF1 Tursiops truncatus ENSTTRG00000014065 N 0.730
TRERF1 Oryctolagus cuniculus ENSOCUG00000016703 N
TRERF1 Otolemur garnettii ENSOGAG00000025610 N 0.739
ENSPANG00000009451 Papio anubis ENSPANG00000009451 N 0.739
ENSPPYG00000016614 Pongo abelii ENSPPYG00000016614 N 0.728
ENSPSIG00000009755 Pelodiscus sinensis ENSPSIG00000009755 N 0.722
TRERF1 Pteropus vampyrus ENSPVAG00000007626 N 0.739
Trerf1 Rattus norvegicus ENSRNOG00000022598 N 0.739
ENSSHAG00000004599 Sarcophilus harrisii ENSSHAG00000004599 N 0.730
TRERF1 Sus scrofa ENSSSCG00000001639 N 0.739
ENSSTOG00000022996 Ictidomys tridecemlineatus ENSSTOG00000022996 N 0.730
ENSTBEG00000012133 Tupaia belangeri ENSTBEG00000012133 N 0.739
TRERF1 Taeniopygia guttata ENSTGUG00000003250 N 0.748
ENSTSYG00000003874 Tarsius syrichta ENSTSYG00000003874 N 0.739
ENSOARG00000003358 Ovis aries ENSOARG00000003358 N 0.739
Aan_R011464 Calypte anna Aan_R011464 N 0.739
Afo_R004751 Aptenodytes forsteri Afo_R004751 N
Brh_R013432 Buceros rhinoceros Brh_R013432 N
Cmyd_10010458 Chelonia mydas Cmyd_10010458 N 0.913
ENSBTAP00000020376-D1 Bos grunniens ENSBTAP00000020376-D1 N 0.739
ENSP00000362013 Macaca fascicularis ENSP00000362013 N 0.924
Gfo_R010962 Geospiza fortis Gfo_R010962 N
Myotis_brandtii_Trerf1_10015386 Myotis brandtii Myotis_brandtii_Trerf1_10015386 N 0.730
Ogr07462 Ophisaurus gracilis Ogr07462 N 0.880
Pvit_13408 Pogona vitticeps Pvit_13408 N
trerf1 Xenopus tropicalis XB-GENE-940630 N
TRERF1 Homo sapiens ENSG00000124496 N 0.739
ENSAMXG00000000792 Astyanax mexicanus ENSAMXG00000000792 N
ENSAPLG00000014876 Anas platyrhynchos ENSAPLG00000014876 N 0.748
TRERF1 Bos taurus ENSBTAG00000015321 N 0.739
TRERF1 Canis familiaris ENSCAFG00000001642 N 0.739
TRERF1 Choloepus hoffmanni ENSCHOG00000006120 N 0.739
TRERF1 Callithrix jacchus ENSCJAG00000004347 N 0.739
TRERF1 Cavia porcellus ENSCPOG00000015717 N 0.722
ENSCSAG00000011422 Chlorocebus sabaeus ENSCSAG00000011422 N
BX000363.1 Danio rerio ENSDARG00000088631 N
TRERF1 Equus caballus ENSECAG00000016971 N 0.739
ENSFALG00000012590 Ficedula albicollis ENSFALG00000012590 N 0.754
TRERF1 Felis catus ENSFCAG00000011210 N 0.739
TRERF1 Anolis carolinensis ENSACAG00000001080 N
TRERF1 Gallus gallus ENSGALG00000009896 N 0.730
TRERF1 Gorilla gorilla ENSGGOG00000012813 N 0.739
ENSLACG00000008926 Latimeria chalumnae ENSLACG00000008926 N
TRERF1 Loxodonta africana ENSLAFG00000007825 N 0.739
ENSLOCG00000017240 Lepisosteus oculatus ENSLOCG00000017240 N
TRERF1 Meleagris gallopavo ENSMGAG00000013894 N 0.739
TRERF1 Microcebus murinus ENSMICG00000011387 N
TRERF1 Myotis lucifugus ENSMLUG00000016748 N 0.730
TRERF1 Monodelphis domestica ENSMODG00000019042 N 0.730
ENSMPUG00000013360 Mustela putorius furo ENSMPUG00000013360 N 0.739
ENSNLEG00000004772 Nomascus leucogenys ENSNLEG00000004772 N 0.739
TRERF1 Ornithorhynchus anatinus ENSOANG00000008467 N 0.730