Cla005913 (Citrullus lanatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cla005913 T133933_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.777 0.864
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.777 0.864
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla005913 C2H2 ZF 139 160
Cla005913 C2H2 ZF 159 186

Links

Other C2H2 ZF family TFs
Other Citrullus lanatus TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zbtb17 Mus musculus ENSMUSG00000006215 D
ZBTB17 Homo sapiens ENSG00000116809 D
ENSSTOG00000005696 Ictidomys tridecemlineatus ENSSTOG00000005696 I
ENSONIG00000006553 Oreochromis niloticus ENSONIG00000006553 I
ZBTB17 Ochotona princeps ENSOPRG00000015846 I
ENSPANG00000015972 Papio anubis ENSPANG00000015972 I
ZBTB17 Procavia capensis ENSPCAG00000009449 I
ENSPFOG00000015192 Poecilia formosa ENSPFOG00000015192 I
ENSPPYG00000001833 Pongo abelii ENSPPYG00000001833 I
ZBTB17 Pan troglodytes ENSPTRG00000000211 I
ZBTB17 Pteropus vampyrus ENSPVAG00000013802 I
Zbtb17 Rattus norvegicus ENSRNOG00000010436 I
ZBTB17 Sorex araneus ENSSARG00000006626 I
ZBTB17 Oryctolagus cuniculus ENSOCUG00000026236 I
ZBTB17 Taeniopygia guttata ENSTGUG00000002039 I
zbtb17 Tetraodon nigroviridis ENSTNIG00000010902 I
zbtb17 Takifugu rubripes ENSTRUG00000003277 I
ZBTB17 Tursiops truncatus ENSTTRG00000015707 I
ENSP00000364885 Macaca fascicularis ENSP00000364885 I
Myotis_brandtii_ZBTB17_10010507 Myotis brandtii Myotis_brandtii_ZBTB17_10010507 I
Ogr02991 Ophisaurus gracilis Ogr02991 I
Pvit_06232 Pogona vitticeps Pvit_06232 I
zbtb17.S Xenopus laevis XB-GENE-6254499 I
zbtb17 Xenopus tropicalis XB-GENE-940673 I
ENSGALG00000003669 Gallus gallus ENSGALG00000003669 I
ENSAPLG00000012761 Anas platyrhynchos ENSAPLG00000012761 I
ZBTB17 Bos taurus ENSBTAG00000018730 I
ZBTB17 Canis familiaris ENSCAFG00000016122 I
ZBTB17 Callithrix jacchus ENSCJAG00000008499 I
ZBTB17 Cavia porcellus ENSCPOG00000014042 I
zbtb17 Danio rerio ENSDARG00000074548 I
ZBTB17 Dasypus novemcinctus ENSDNOG00000001983 I
ZBTB17 Equus caballus ENSECAG00000024826 I
ENSFALG00000003542 Ficedula albicollis ENSFALG00000003542 I
zbtb17 Gasterosteus aculeatus ENSGACG00000005273 I
ZBTB17 Otolemur garnettii ENSOGAG00000005075 I
ZBTB17 Gorilla gorilla ENSGGOG00000012058 I
ENSGMOG00000008387 Gadus morhua ENSGMOG00000008387 I
ZBTB17 Loxodonta africana ENSLAFG00000004528 I
ENSMEUG00000000608 Macropus eugenii ENSMEUG00000000608 I
ZBTB17 Myotis lucifugus ENSMLUG00000025202 I
ZBTB17 Macaca mulatta ENSMMUG00000008031 I
ZBTB17 Monodelphis domestica ENSMODG00000003391 I
ENSNLEG00000007658 Nomascus leucogenys ENSNLEG00000007658 I
ZBTB17 Ornithorhynchus anatinus ENSOANG00000008832 I
ENSAMXG00000012547 Astyanax mexicanus ENSAMXG00000012547 I