CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.430.61.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw.430.61.1
T138272_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.430.61.1
C2H2 ZF
1
23
YICRFCGYVTNRKGNRDTHLRTH
e_gw.430.61.1
C2H2 ZF
29
51
YKCRFCNYAAAYRSSVVVHERRH
e_gw.430.61.1
C2H2 ZF
57
80
YRCPACTYSALQKTSLNQHMLKHH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PNEG_00396
Pneumocystis murina
PNEG_00396
N
SJAG_02401
Schizosaccharomyces japonicus
SJAG_02401
N
SOCG_02447
Schizosaccharomyces octosporus
SOCG_02447
N
SOCG_03518
Schizosaccharomyces octosporus
SOCG_03518
N
lsd2
Schizosaccharomyces pombe
SPAC23E2.02
N
SPOG_01553
Schizosaccharomyces cryophilus
SPOG_01553
N
SPOG_04221
Schizosaccharomyces cryophilus
SPOG_04221
N
PredSwiss_ASS2010_405.1
Pneumocystis carinii
PredSwiss_ASS2010_405.1
N
PredSwiss_CON4.1
Pneumocystis carinii
PredSwiss_CON4.1
N