CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshPB_pg.C_400080
(
Phycomyces blakesleeanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgeneshPB_pg.C_400080
T138835_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshPB_pg.C_400080
C2H2 ZF
258
283
YKCPVPGCDKAYKNPNGLKYHNQHGH
estExt_fgeneshPB_pg.C_400080
C2H2 ZF
299
324
YQCTIGECGKRYKNLNGLKYHIEHSH
Links
Other
C2H2 ZF
family TFs
Other
Phycomyces blakesleeanus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPSIG00000003795
Pelodiscus sinensis
ENSPSIG00000003795
N
Pvit_19128
Pogona vitticeps
Pvit_19128
N
Ogr14077
Ophisaurus gracilis
Ogr14077
N
Cmyd_10008757
Chelonia mydas
Cmyd_10008757
N
Brh_R004220
Buceros rhinoceros
Brh_R004220
N
Alligator_sinensis_CCG015510.1
Alligator sinensis
Alligator_sinensis_CCG015510.1
N
Afo_R009925
Aptenodytes forsteri
Afo_R009925
N
Aan_R010858
Calypte anna
Aan_R010858
N
ENSXMAG00000002506
Xiphophorus maculatus
ENSXMAG00000002506
N
her8.2
Takifugu rubripes
ENSTRUG00000006663
N
her8.2
Tetraodon nigroviridis
ENSTNIG00000000385
N
ENSTGUG00000005406
Taeniopygia guttata
ENSTGUG00000005406
N
ENSACAG00000002708
Anolis carolinensis
ENSACAG00000002708
N
her8.2
Oryzias latipes
ENSORLG00000015428
N
ENSONIG00000007948
Oreochromis niloticus
ENSONIG00000007948
N
ENSOANG00000011082
Ornithorhynchus anatinus
ENSOANG00000011082
N
ENSMGAG00000004179
Meleagris gallopavo
ENSMGAG00000004179
N
ENSLOCG00000004481
Lepisosteus oculatus
ENSLOCG00000004481
N
ENSLACG00000002946
Latimeria chalumnae
ENSLACG00000002946
N
ENSGALG00000028415
Gallus gallus
ENSGALG00000028415
N
ENSFALG00000004045
Ficedula albicollis
ENSFALG00000004045
N
ENSAPLG00000005097
Anas platyrhynchos
ENSAPLG00000005097
N
ENSAMXG00000008703
Astyanax mexicanus
ENSAMXG00000008703
N