CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshPB_pg.C_400080
(
Phycomyces blakesleeanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgeneshPB_pg.C_400080
T138835_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshPB_pg.C_400080
C2H2 ZF
258
283
YKCPVPGCDKAYKNPNGLKYHNQHGH
estExt_fgeneshPB_pg.C_400080
C2H2 ZF
299
324
YQCTIGECGKRYKNLNGLKYHIEHSH
Links
Other
C2H2 ZF
family TFs
Other
Phycomyces blakesleeanus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshMC_kg.C_20023
Mucor circinelloides
estExt_fgeneshMC_kg.C_20023
N
0.827
estExt_fgeneshPB_pg.C_170209
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_170209
N
0.827
RO3G_00402
Rhizopus oryzae
RO3G_00402
N
0.821
RO3G_15062
Rhizopus oryzae
RO3G_15062
N
0.821
estExt_fgeneshMC_pg.C_60494
Mucor circinelloides
estExt_fgeneshMC_pg.C_60494
N
0.821
RO3G_06094
Rhizopus oryzae
RO3G_06094
N
0.816
RO3G_08482
Rhizopus oryzae
RO3G_08482
N
0.816
RO3G_02124
Rhizopus oryzae
RO3G_02124
N
0.782
PV09_00537
Verruconis gallopava
PV09_00537
I
0.776
GSTUM_00008521001
Tuber melanosporum
GSTUM_00008521001
I
0.767