CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_Genewise1Plus.C_31872
(
Neurospora discreta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_Genewise1Plus.C_31872
T138877_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU07952
M01890_2.00
Neurospora crassa
YWNMGCCHY
RDGGCKNWR
PBM
Weirauch et al.(2014)
pTH9003
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_31872
C2H2 ZF
490
512
FQCKVCPKRFTRAYNLRSHLRTH
estExt_Genewise1Plus.C_31872
C2H2 ZF
518
540
FKCTVCDKAFARQHDRKRHEGLH
estExt_Genewise1Plus.C_31872
C2H2 ZF
547
577
ICKGELPVAGQQWGCGRRFARADALGRHFRS
Links
Other
C2H2 ZF
family TFs
Other
Neurospora discreta
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_02982
Verticillium albo atrum
VDBG_02982
N
FFUJ_06792
Fusarium fujikuroi
FFUJ_06792
N
FOXG_04795
Fusarium oxysporum
FOXG_04795
N
FVEG_03338
Fusarium verticillioides
FVEG_03338
N
NechaG91591
Fusarium solani
NechaG91591
N
TSTA_025250
Talaromyces stipitatus
TSTA_025250
N
VDAG_03890
Verticillium dahliae
VDAG_03890
N
VDBG_02982
Verticillium alfalfae
VDBG_02982
N
fgenesh1_pm.sca_44_chr3_2_0000059
Nectria haematococca
fgenesh1_pm.sca_44_chr3_2_0000059
N
PMAA_017320
Penicillium marneffei
PMAA_017320
N