Ocbimv22008776m.g (Octopus bimaculoides)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ocbimv22008776m.g T140705_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22008776m.p C2H2 ZF 27 49
Ocbimv22008776m.p C2H2 ZF 55 77
Ocbimv22008776m.p C2H2 ZF 83 105
Ocbimv22008776m.p C2H2 ZF 111 133
Ocbimv22008776m.p C2H2 ZF 139 161
Ocbimv22008776m.p C2H2 ZF 167 189
Ocbimv22008776m.p C2H2 ZF 195 215
Ocbimv22008776m.p C2H2 ZF 223 245
Ocbimv22008776m.p C2H2 ZF 251 273
Ocbimv22008776m.p C2H2 ZF 279 301
Ocbimv22008776m.p C2H2 ZF 307 329
Ocbimv22008776m.p C2H2 ZF 335 357
Ocbimv22008777m.p C2H2 ZF 27 49
Ocbimv22008777m.p C2H2 ZF 55 77
Ocbimv22008777m.p C2H2 ZF 83 105
Ocbimv22008777m.p C2H2 ZF 111 133
Ocbimv22008777m.p C2H2 ZF 139 161
Ocbimv22008777m.p C2H2 ZF 167 189
Ocbimv22008777m.p C2H2 ZF 195 215
Ocbimv22008777m.p C2H2 ZF 223 245
Ocbimv22008777m.p C2H2 ZF 251 273
Ocbimv22008777m.p C2H2 ZF 279 301
Ocbimv22008777m.p C2H2 ZF 307 329
Ocbimv22008777m.p C2H2 ZF 335 357

Links

Other C2H2 ZF family TFs
Other Octopus bimaculoides TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI02G09060 Oryza rufipogon ORUFI02G09060 N
Pavir.J40109 Panicum virgatum Pavir.J40109 N
Pavir.J30600 Panicum virgatum Pavir.J30600 N
TRIUR3_19577 Triticum urartu TRIUR3_19577 N
Traes_6AS_4D5775944 Triticum aestivum Traes_6AS_4D5775944 N
Si019540m.g Setaria italica Si019540m.g N
Si007981m.g Setaria italica Si007981m.g N
Sb10g022530 Sorghum bicolor Sb10g022530 N
Sb04g007795 Sorghum bicolor Sb04g007795 N
OS02G0221100 Oryza sativa OS02G0221100 N
BGIOSGA006856 Oryza indica BGIOSGA006856 N
OPUNC02G08070 Oryza punctata OPUNC02G08070 N
ONIVA11G03290 Oryza nivara ONIVA11G03290 N
OMERI02G10300 Oryza meridionalis OMERI02G10300 N
OGLUM02G09240 Oryza glumaepatula OGLUM02G09240 N
LPERR02G07820 Leersia perrieri LPERR02G07820 N
GRMZM2G340177 Zea mays GRMZM2G340177 N
GRMZM2G170559 Zea mays GRMZM2G170559 N
F775_18168 Aegilops tauschii F775_18168 N
BRADI3G08280 Brachypodium distachyon BRADI3G08280 N