CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ocbimv22008776m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22008776m.g
T140705_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22008776m.p
C2H2 ZF
27
49
YPCDICGKTFSQSSNVIQHKLIH
Ocbimv22008776m.p
C2H2 ZF
55
77
YACGVCGKRFTANSSLSCHKRIH
Ocbimv22008776m.p
C2H2 ZF
83
105
YNCNVCGKAFTIKSNLTSHERIH
Ocbimv22008776m.p
C2H2 ZF
111
133
FHCEVCGKTLARSTELAHHIRTH
Ocbimv22008776m.p
C2H2 ZF
139
161
YQCDVCDKAFSKKDSLVRHQRIH
Ocbimv22008776m.p
C2H2 ZF
167
189
YSCDICGRTFSLKGSLSTHQRTH
Ocbimv22008776m.p
C2H2 ZF
195
215
YQCSICGKILYRKHDLVRHNC
Ocbimv22008776m.p
C2H2 ZF
223
245
FICNVCGEEFLQKCHLFNHKQTH
Ocbimv22008776m.p
C2H2 ZF
251
273
YHCDICDKPFSQRNQLLVHKRTH
Ocbimv22008776m.p
C2H2 ZF
279
301
YNCDICGYMFSQKGHLSRHRRIH
Ocbimv22008776m.p
C2H2 ZF
307
329
YLCDICGKSFSRCNNLSSHVRTH
Ocbimv22008776m.p
C2H2 ZF
335
357
FECDVCGEAFTVNSQLSTHKGIH
Ocbimv22008777m.p
C2H2 ZF
27
49
YPCDICGKTFSQSSNVIQHKLIH
Ocbimv22008777m.p
C2H2 ZF
55
77
YACGVCGKRFTANSSLSCHKRIH
Ocbimv22008777m.p
C2H2 ZF
83
105
YNCNVCGKAFTIKSNLTSHERIH
Ocbimv22008777m.p
C2H2 ZF
111
133
FHCEVCGKTLARSTELAHHIRTH
Ocbimv22008777m.p
C2H2 ZF
139
161
YQCDVCDKAFSKKDSLVRHQRIH
Ocbimv22008777m.p
C2H2 ZF
167
189
YSCDICGRTFSLKGSLSTHQRTH
Ocbimv22008777m.p
C2H2 ZF
195
215
YQCSICGKILYRKHDLVRHNC
Ocbimv22008777m.p
C2H2 ZF
223
245
FICNVCGEEFLQKCHLFNHKQTH
Ocbimv22008777m.p
C2H2 ZF
251
273
YHCDICDKPFSQRNQLLVHKRTH
Ocbimv22008777m.p
C2H2 ZF
279
301
YNCDICGYMFSQKGHLSRHRRIH
Ocbimv22008777m.p
C2H2 ZF
307
329
YLCDICGKSFSRCNNLSSHVRTH
Ocbimv22008777m.p
C2H2 ZF
335
357
FECDVCGEAFTVNSQLSTHKGIH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action