CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30014668m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30014668m.g
T142263_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23937893_peptide
C2H2 ZF
171
193
LKCSSCERTFRCQRGLTTHVRTH
23937893_peptide
C2H2 ZF
196
218
YKCKNCTLEFATKHKLTRHLKMH
23937893_peptide
C2H2 ZF
224
246
YVCAKCGDRFLNNSALLDHMKTH
23937893_peptide
C2H2 ZF
251
273
VECRQCGKQFSLQRNLNIHMKIH
23937893_peptide
C2H2 ZF
279
301
CECQYCDYRCRDKGILKRHMAKH
23937893_peptide
C2H2 ZF
309
331
LKCKHCGKGFVRQYDMNVHIQFH
23937893_peptide
C2H2 ZF
337
359
FKCENCEKSYYTKGHLREHMRKH
23937893_peptide
C2H2 ZF
365
387
YRCDKCGTTFRLKIFLDDHLVTH
23937893_peptide
C2H2 ZF
393
415
HQCGVCGKGFTRAATLSVHMRTH
23937893_peptide
C2H2 ZF
421
444
YECGDCGKRFTTKSHLKNHVVAVH
23937893_peptide
C2H2 ZF
459
481
HMCEHCGKIYYNKSTLVIHQRVH
23937893_peptide
C2H2 ZF
487
509
YQCPQCDHTFASARNLKSHLHFH
23937893_peptide
C2H2 ZF
515
537
YQCMLCGKCCSTKNHLKVHQRVH
23937893_peptide
C2H2 ZF
543
565
YKCTVCGKSYVTSSHLKFHQLVH
23937893_peptide
C2H2 ZF
571
593
HKCGLCFQQFRSKQALKSHMRGH
23937893_peptide
C2H2 ZF
599
621
FQCEKCGKLFTNKRPLKEHLRLH
23937893_peptide
C2H2 ZF
627
649
YKCELCDDRFRLLKQLHSHERKH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sakowv30014672m.g
Saccoglossus kowalevskii
Sakowv30014672m.g
N
0.827