CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30014672m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30014672m.g
T142264_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23937886_peptide
C2H2 ZF
31
53
LKCSSCERTFRCQRGLTTHVRTH
23937886_peptide
C2H2 ZF
56
78
YKCKNCTLEFATKHKLTRHLKMH
23937886_peptide
C2H2 ZF
84
106
YVCAKCGDRFLNNSALLDHMKTH
23937886_peptide
C2H2 ZF
111
133
VECRQCGKQFSSQRNLNIHMKIH
23937886_peptide
C2H2 ZF
139
161
CECQYCDYRCRDKGILKRHMAKH
23937886_peptide
C2H2 ZF
169
191
LKCKHCGKGFVRQYDMNVHIQFH
23937886_peptide
C2H2 ZF
197
219
FKCENCEKSYYTKGHLREHMRKH
23937886_peptide
C2H2 ZF
225
247
YRCDKCGTTFRLKIFLDDHLVTH
23937886_peptide
C2H2 ZF
253
275
HQCGVCGKGFTRAATLSVHMRTH
23937886_peptide
C2H2 ZF
281
304
HECGDCGKRFTTKSHLKNHVVAVH
23937886_peptide
C2H2 ZF
319
341
HMCEHCGKIYYNKSTLVIHQRVH
23937886_peptide
C2H2 ZF
347
369
YQCPQCDHTFASARNLKSHLHFH
23937886_peptide
C2H2 ZF
375
397
YQCMLCGKCCSTKNHLKVHQRVH
23937886_peptide
C2H2 ZF
403
425
YKCTVCGKSYVTSSHLKFHQLVH
23937886_peptide
C2H2 ZF
431
453
HKCGLCFQQFRSKQALKSHMRGH
23937886_peptide
C2H2 ZF
459
481
FQCEKCGKLFTNKRPLKEHLRLH
23937886_peptide
C2H2 ZF
487
509
YKCELCDDRFRLLKQLHSHERKH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sakowv30014668m.g
Saccoglossus kowalevskii
Sakowv30014668m.g
N
0.827