Bostr.13158s0058 (Boechera stricta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Bostr.13158s0058 T142573_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.827 0.978
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.827 0.957
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.802 0.870
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.799 0.739
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.776 0.717
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.776 0.717
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.776 0.717
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.775 0.717
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.766 0.761
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.766 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.13158s0058.1.p C2H2 ZF 194 216
Bostr.13158s0058.1.p C2H2 ZF 245 267

Links

Other C2H2 ZF family TFs
Other Boechera stricta TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DEAF1 Pan troglodytes ENSPTRG00000003129 D 0.000
CpipJ_CPIJ007045 Culex pipiens CpipJ_CPIJ007045 I 0.000
AAEL013408 Aedes aegypti AAEL013408 I 0.000
ACEP13992 Atta cephalotes ACEP13992 I 0.000
ADAC006957 Anopheles darlingi ADAC006957 I 0.000
AGAP004905 Anopheles gambiae AGAP004905 I 0.000
BGIBMGA002019 Bombyx mori BGIBMGA002019 I 0.000
CapteG228571 Capitella teleta CapteG228571 I 0.000
CGI_10012910 Crassostrea gigas CGI_10012910 I 0.000
CPIJ007045 Culex quinquefasciatus CPIJ007045 I 0.000
DEAF1 Anolis carolinensis ENSACAG00000015102 I 0.000
ENSAMEG00000010672 Ailuropoda melanoleuca ENSAMEG00000010672 I 0.000
ENSAMXG00000016516 Astyanax mexicanus ENSAMXG00000016516 I 0.000
ENSAPLG00000011215 Anas platyrhynchos ENSAPLG00000011215 I 0.000
DEAF1 Canis familiaris ENSCAFG00000006569 I 0.000
DEAF1 Callithrix jacchus ENSCJAG00000011996 I 0.000
DEAF1 Cavia porcellus ENSCPOG00000006073 I 0.000
ENSCSAG00000010763 Chlorocebus sabaeus ENSCSAG00000010763 I 0.000
deaf1 Danio rerio ENSDARG00000088844 I 0.000
DEAF1 Dasypus novemcinctus ENSDNOG00000000274 I 0.000
Deaf1 Dipodomys ordii ENSDORG00000015737 I 0.000
DEAF1 Equus caballus ENSECAG00000010151 I 0.000
ENSFALG00000010923 Ficedula albicollis ENSFALG00000010923 I 0.000
DEAF1 Felis catus ENSFCAG00000007591 I 0.000
DEAF1 Homo sapiens ENSG00000177030 I 0.000
deaf1 Gasterosteus aculeatus ENSGACG00000008942 I 0.000
ENSGALG00000005089 Gallus gallus ENSGALG00000005089 I 0.000
DEAF1 Gorilla gorilla ENSGGOG00000014020 I 0.000
ENSGMOG00000000222 Gadus morhua ENSGMOG00000000222 I 0.000
ENSLACG00000014207 Latimeria chalumnae ENSLACG00000014207 I 0.000
DEAF1 Loxodonta africana ENSLAFG00000023242 I 0.000
ENSLOCG00000002360 Lepisosteus oculatus ENSLOCG00000002360 I 0.000
ENSMEUG00000005016 Macropus eugenii ENSMEUG00000005016 I 0.000
DEAF1 Meleagris gallopavo ENSMGAG00000003765 I 0.000
DEAF1 Microcebus murinus ENSMICG00000001602 I 0.000
DEAF1 Myotis lucifugus ENSMLUG00000026576 I 0.000
DEAF1 Macaca mulatta ENSMMUG00000002660 I 0.000
ENSMPUG00000008992 Mustela putorius furo ENSMPUG00000008992 I 0.000
Deaf1 Mus musculus ENSMUSG00000058886 I 0.000
ENSNLEG00000008479 Nomascus leucogenys ENSNLEG00000008479 I 0.000
ENSOARG00000006285 Ovis aries ENSOARG00000006285 I 0.000
DEAF1 Otolemur garnettii ENSOGAG00000006434 I 0.000
ENSONIG00000003936 Oreochromis niloticus ENSONIG00000003936 I 0.000
ENSOPRG00000002240 Ochotona princeps ENSOPRG00000002240 I 0.000
deaf1 Oryzias latipes ENSORLG00000019407 I 0.000
ENSPANG00000008597 Papio anubis ENSPANG00000008597 I 0.000
ENSPFOG00000014257 Poecilia formosa ENSPFOG00000014257 I 0.000
ENSPMAG00000004264 Petromyzon marinus ENSPMAG00000004264 I 0.000
ENSPSIG00000016545 Pelodiscus sinensis ENSPSIG00000016545 I 0.000
DEAF1 Pteropus vampyrus ENSPVAG00000006883 I 0.000
Deaf1 Rattus norvegicus ENSRNOG00000017960 I 0.000
ENSSHAG00000002042 Sarcophilus harrisii ENSSHAG00000002042 I 0.000
DEAF1 Sus scrofa ENSSSCG00000012850 I 0.000
ENSSTOG00000004165 Ictidomys tridecemlineatus ENSSTOG00000004165 I 0.000
ENSTBEG00000010230 Tupaia belangeri ENSTBEG00000010230 I 0.000
DEAF1 Taeniopygia guttata ENSTGUG00000007185 I 0.000
deaf1 Tetraodon nigroviridis ENSTNIG00000016068 I 0.000
deaf1 Takifugu rubripes ENSTRUG00000002931 I 0.000
DEAF1 Tursiops truncatus ENSTTRG00000015418 I 0.000
ENSXMAG00000013352 Xiphophorus maculatus ENSXMAG00000013352 I 0.000
GB41654 Apis mellifera GB41654 I 0.000
HMEL013517 Heliconius melpomene HMEL013517 I 0.000
ISCW003915 Ixodes scapularis ISCW003915 I 0.000
KGM_18605 Danaus plexippus KGM_18605 I 0.000
L798_01684 Zootermopsis nevadensis L798_01684 I 0.000
LotgiG168359 Lottia gigantea LotgiG168359 I 0.000
MCINX013640 Melitaea cinxia MCINX013640 I 0.000
NV18168 Nasonia vitripennis NV18168 I 0.000
PHUM581340 Pediculus humanus PHUM581340 I 0.000
SINV20880 Solenopsis invicta SINV20880 I 0.000
SMAR003119 Strigamia maritima SMAR003119 I 0.000
TC000085 Tribolium castaneum TC000085 I 0.000
YQE_06816 Dendroctonus ponderosae YQE_06816 I 0.000
Aan_R010721 Calypte anna Aan_R010721 I 0.000
Afo_R011879 Aptenodytes forsteri Afo_R011879 I 0.000
Alligator_sinensis_CCG021031.1 Alligator sinensis Alligator_sinensis_CCG021031.1 I 0.000
Brh_R009745 Buceros rhinoceros Brh_R009745 I 0.000
Cflo_07037--XP_395757.2_APIME Camponotus floridanus Cflo_07037--XP_395757.2_APIME I 0.000
Cmyd_10004045 Chelonia mydas Cmyd_10004045 I 0.000
ENSP00000371846-D1 Bos grunniens ENSP00000371846-D1 I 0.000
ENSP00000371846 Macaca fascicularis ENSP00000371846 I 0.000
Hsal_03559--XP_395757.2_APIME Harpegnathos saltator Hsal_03559--XP_395757.2_APIME I 0.000
Myotis_brandtii_DEAF1_10008461 Myotis brandtii Myotis_brandtii_DEAF1_10008461 I 0.000
Ogr05554 Ophisaurus gracilis Ogr05554 I 0.000
Pvit_08245 Pogona vitticeps Pvit_08245 I 0.000
fgenesh2_pg.scaffold_59000067 Branchiostoma floridae fgenesh2_pg.scaffold_59000067 I 0.000
fgenesh2_pg.scaffold_59000072 Branchiostoma floridae fgenesh2_pg.scaffold_59000072 I 0.000
Ocbimv22013386m.g Octopus bimaculoides Ocbimv22013386m.g I 0.000
Sakowv30032927m.g Saccoglossus kowalevskii Sakowv30032927m.g I 0.000
HHAL006904-PA Halyomorpha halys HHAL006904-PA I 0.000
LDEC013410 Leptinotarsa decemlineata LDEC013410 I 0.000
deaf1 Xenopus tropicalis XB-GENE-1216227 I 0.000
AALB004583 Anopheles albimanus AALB004583 I 0.000
AARA003510 Anopheles arabiensis AARA003510 I 0.000
AATE015987 Anopheles atroparvus AATE015987 I 0.000
ACHR007416 Anopheles christyi ACHR007416 I 0.000
ACOM036369 Anopheles coluzzii ACOM036369 I 0.000
ACUA011008 Anopheles culicifacies ACUA011008 I 0.000
ADIR001685 Anopheles dirus ADIR001685 I 0.000
AEPI005273 Anopheles epiroticus AEPI005273 I 0.000
AFAF013455 Anopheles farauti AFAF013455 I 0.000
AFUN005053 Anopheles funestus AFUN005053 I 0.000
AMAM018568 Anopheles maculatus AMAM018568 I 0.000
AMEC000569 Anopheles melas AMEC000569 I 0.000
AMEM010249 Anopheles merus AMEM010249 I 0.000
AMIN011402 Anopheles minimus AMIN011402 I 0.000
AQUA000322 Anopheles quadriannulatus AQUA000322 I 0.000
ASIS014192 Anopheles sinensis ASIS014192 I 0.000
ASTEI10643 Anopheles stephensi ASTEI10643 I 0.000
BGLB009094 Biomphalaria glabrata BGLB009094 I 0.000
LLOJ006782 Lutzomyia longipalpis LLOJ006782 I 0.000
PPAI007052 Phlebotomus papatasi PPAI007052 I 0.000