Gorai.008G169500 (Gossypium raimondii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gorai.008G169500 T143051_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.796 0.884
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.796 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G169500.1 C2H2 ZF 134 155
Gorai.008G169500.1 C2H2 ZF 155 181

Links

Other C2H2 ZF family TFs
Other Gossypium raimondii TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Msgn1 Mus musculus ENSMUSG00000047002 D 0.000
MSGN1 Homo sapiens ENSG00000151379 D 0.000
MSGN1 Oryctolagus cuniculus ENSOCUG00000000309 I 0.000
MSGN1 Ornithorhynchus anatinus ENSOANG00000002188 I 0.000
MSGN1 Otolemur garnettii ENSOGAG00000012569 I 0.000
ENSPANG00000004064 Papio anubis ENSPANG00000004064 I 0.000
MSGN1 Procavia capensis ENSPCAG00000015116 I 0.000
ENSPPYG00000012628 Pongo abelii ENSPPYG00000012628 I 0.000
MSGN1 Pan troglodytes ENSPTRG00000011679 I 0.000
MSGN1 Pteropus vampyrus ENSPVAG00000015666 I 0.000
Msgn1 Rattus norvegicus ENSRNOG00000028518 I 0.000
MSGN1 Sorex araneus ENSSARG00000007866 I 0.000
MSGN1 Sus scrofa ENSSSCG00000026538 I 0.000
ENSSTOG00000013981 Ictidomys tridecemlineatus ENSSTOG00000013981 I 0.000
MSGN1 Taeniopygia guttata ENSTGUG00000013122 I 0.000
ENSTSYG00000003733 Tarsius syrichta ENSTSYG00000003733 I 0.000
MSGN1 Tursiops truncatus ENSTTRG00000015917 I 0.000
Aan_R015364 Calypte anna Aan_R015364 I 0.000
Afo_R001760 Aptenodytes forsteri Afo_R001760 I 0.000
Alligator_sinensis_CCG020380.1 Alligator sinensis Alligator_sinensis_CCG020380.1 I 0.000
Brh_R011720 Buceros rhinoceros Brh_R011720 I 0.000
Cmyd_10010636 Chelonia mydas Cmyd_10010636 I 0.000
ENSP00000281047-D1 Bos grunniens ENSP00000281047-D1 I 0.000
ENSP00000281047 Macaca fascicularis ENSP00000281047 I 0.000
Gfo_R015241 Geospiza fortis Gfo_R015241 I 0.000
Myotis_brandtii_MSGN1_10020188 Myotis brandtii Myotis_brandtii_MSGN1_10020188 I 0.000
Ogr03919 Ophisaurus gracilis Ogr03919 I 0.000
Pvit_07087 Pogona vitticeps Pvit_07087 I 0.000
Tal_R008386 Tyto alba Tal_R008386 I 0.000
MSGN1 Gallus gallus ENSGALG00000016469 I 0.000
ENSAMEG00000019874 Ailuropoda melanoleuca ENSAMEG00000019874 I 0.000
ENSAPLG00000001852 Anas platyrhynchos ENSAPLG00000001852 I 0.000
MSGN1 Bos taurus ENSBTAG00000039113 I 0.000
MSGN1 Canis familiaris ENSCAFG00000003750 I 0.000
MSGN1 Callithrix jacchus ENSCJAG00000032633 I 0.000
MSGN1 Cavia porcellus ENSCPOG00000003061 I 0.000
ENSCSAG00000000377 Chlorocebus sabaeus ENSCSAG00000000377 I 0.000
MSGN1 Dasypus novemcinctus ENSDNOG00000013441 I 0.000
Msgn1 Dipodomys ordii ENSDORG00000003509 I 0.000
MSGN1 Equus caballus ENSECAG00000002724 I 0.000
MSGN1 Erinaceus europaeus ENSEEUG00000015222 I 0.000
ENSFALG00000001820 Ficedula albicollis ENSFALG00000001820 I 0.000
MSGN1 Felis catus ENSFCAG00000013583 I 0.000
ENSOARG00000016765 Ovis aries ENSOARG00000016765 I 0.000
MSGN1 Gorilla gorilla ENSGGOG00000012168 I 0.000
MSGN1 Loxodonta africana ENSLAFG00000015319 I 0.000
ENSLOCG00000017878 Lepisosteus oculatus ENSLOCG00000017878 I 0.000
ENSMEUG00000006206 Macropus eugenii ENSMEUG00000006206 I 0.000
MSGN1 Meleagris gallopavo ENSMGAG00000016374 I 0.000
ENSMICG00000010842 Microcebus murinus ENSMICG00000010842 I 0.000
MSGN1 Myotis lucifugus ENSMLUG00000007599 I 0.000
MSGN1 Macaca mulatta ENSMMUG00000008141 I 0.000
MSGN1 Monodelphis domestica ENSMODG00000004056 I 0.000
ENSMPUG00000019484 Mustela putorius furo ENSMPUG00000019484 I 0.000
ENSNLEG00000018810 Nomascus leucogenys ENSNLEG00000018810 I 0.000
ENSACAG00000001604 Anolis carolinensis ENSACAG00000001604 I 0.000