Pavir.Ea03512 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Ea03512 T143343_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03512.1.p C2H2 ZF 1221 1244
Pavir.Ea03512.1.p C2H2 ZF 1245 1268
Pavir.Ea03512.1.p C2H2 ZF 1274 1298
Pavir.Ea03512.1.p C2H2 ZF 1304 1330
Pavir.Ea03512.2.p C2H2 ZF 1211 1234
Pavir.Ea03512.2.p C2H2 ZF 1235 1258
Pavir.Ea03512.2.p C2H2 ZF 1264 1288
Pavir.Ea03512.2.p C2H2 ZF 1294 1320

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si000062m.g Setaria italica Si000062m.g N 0.764
Pavir.J31927 Panicum virgatum Pavir.J31927 N 0.769