SapurV1A.0255s0120 (Salix purpurea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SapurV1A.0255s0120 T143473_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IDD1
M06824_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTWBYD
HRVWAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a 		0.822 0.977
IDD1
M06825_2.00 		Arabidopsis thaliana
WDTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAHW		 Dap-seq
OMalley et al.(2016)
At5g66730_col 		0.822 0.977
IDD5
M06807_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTTSYD
HRSAAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
IDD5_colamp_a 		0.794 0.930
IDD5
M06808_2.00 		Arabidopsis thaliana
WTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAW		 Dap-seq
OMalley et al.(2016)
IDD5_col 		0.794 0.930
AT1G14580
M06797_2.00 		Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWWNNN		 Dap-seq
OMalley et al.(2016)
At1g14580_col_a 		0.794 0.884
AT1G14580
M06798_2.00 		Arabidopsis thaliana
NNTTTTGTCKTTTWSYD
HRSWAAAMGACAAAANN		 Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a 		0.794 0.884
IDD7
M06803_2.00 		Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHHN		 Dap-seq
OMalley et al.(2016)
IDD7_col_a 		0.788 0.907
IDD4
M06809_2.00 		Arabidopsis thaliana
WWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWW		 Dap-seq
OMalley et al.(2016)
IDD4_col_a 		0.788 0.860
MGP
M06795_2.00 		Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAWHDND		 Dap-seq
OMalley et al.(2016)
MGP_col_a 		0.788 0.860
MGP
M06796_2.00 		Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHNN		 Dap-seq
OMalley et al.(2016)
MGP_colamp_a 		0.788 0.860
NUC
M06822_2.00 		Arabidopsis thaliana
NNNNNTTTTGTCKTYTWBYD
HRVWARAMGACAAAANNNNN		 Dap-seq
OMalley et al.(2016)
NUC_col_a 		0.765 0.837
NUC
M06823_2.00 		Arabidopsis thaliana
NDTTTTGTCGTYTWNYD
HRNWARACGACAAAAHN		 Dap-seq
OMalley et al.(2016)
NUC_colamp_a 		0.765 0.837
JKD
M06818_2.00 		Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAWWNDD		 Dap-seq
OMalley et al.(2016)
JKD_col_a 		0.759 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0255s0120.1.p C2H2 ZF 145 166
SapurV1A.0255s0120.1.p C2H2 ZF 165 191

Links

Other C2H2 ZF family TFs
Other Salix purpurea TFs

665 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
hlh-30 Caenorhabditis elegans WBGene00020930 D
OESDEN_00871 Oesophagostomum dentatum OESDEN_00871 I
L893_g28705 Steinernema glaseri L893_g28705 I
L898_g15395 Steinernema monticolum L898_g15395 I
maker-nMf.1.1.scaf11370-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf11370-augustus-gene-0.3 I
MhA1_Contig2854.frz3.gene1 Meloidogyne hapla MhA1_Contig2854.frz3.gene1 I
nAv.1.0.1.g01464 Acanthocheilonema viteae nAv.1.0.1.g01464 I
NBR_0000419201 Nippostrongylus brasiliensis NBR_0000419201 I
nDi.2.2.2.g10686 Dirofilaria immitis nDi.2.2.2.g10686 I
nLs.2.1.2.g08330 Litomosoides sigmodontis nLs.2.1.2.g08330 I
nOo.2.0.1.g06941 Onchocerca ochengi nOo.2.0.1.g06941 I
L892_g6408 Steinernema scapterisci L892_g6408 I
OFLC_0000747401 Onchocerca flexuosa OFLC_0000747401 I
PEQ_0000740201 Parascaris equorum PEQ_0000740201 I
PTRK_0001632300 Parastrongyloides trichosuri PTRK_0001632300 I
RSKR_0000797400 Rhabditophanes kr3021 RSKR_0000797400 I
scaffold257-EXSNAP2012.8 Pristionchus exspectatus scaffold257-EXSNAP2012.8 I
SSTP_0000449500 Strongyloides stercoralis SSTP_0000449500 I
SVE_0222900 Strongyloides venezuelensis SVE_0222900 I
TCLT_0000727601 Thelazia callipaeda TCLT_0000727601 I
ANCCEY_12664 Ancylostoma ceylanicum ANCCEY_12664 I
Bm6133 Brugia malayi Bm6133 I
CBG05364 Caenorhabditis briggsae CBG05364 I
CBG24924 Caenorhabditis briggsae CBG24924 I
CBN07317 Caenorhabditis brenneri CBN07317 I
CRE27827 Caenorhabditis remanei CRE27827 I
WBGene00240746 Onchocerca volvulus WBGene00240746 I
Minc08733 Meloidogyne incognita Minc08733 I
ACAC_0001364601 Angiostrongylus cantonensis ACAC_0001364601 I
WUBG_15170 Wuchereria bancrofti WUBG_15170 I
ASIM_0001200001 Anisakis simplex ASIM_0001200001 I
BXY_0064000 Bursaphelenchus xylophilus BXY_0064000 I
DICVIV_03673 Dictyocaulus viviparus DICVIV_03673 I
DME_0000936301 Dracunculus medinensis DME_0000936301 I
EEL_0001011701 Elaeophora elaphi EEL_0001011701 I
L596_g25887 Steinernema carpocapsae L596_g25887 I
L889_g31943 Steinernema feltiae L889_g31943 I
SMUV_0000920101 Syphacia muris SMUV_0000920101 N
EVEC_0000993501 Enterobius vermicularis EVEC_0000993501 N