Thhalv10028723m.g (Eutrema salsugineum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Thhalv10028723m.g T143584_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YY1
M01443_2.00 		Arabidopsis thaliana
NNNVCWYNN
NNRWGBNNN		 PBM
Najafabadi et al.(2015a)
pTH11160 		0.816 0.948
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10028723m C2H2 ZF 79 103
Thhalv10028723m C2H2 ZF 108 132
Thhalv10028723m C2H2 ZF 138 162
Thhalv10028723m C2H2 ZF 168 193
Thhalv10028723m C2H2 ZF 231 256

Links

Other C2H2 ZF family TFs
Other Eutrema salsugineum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CGGC5_11066 Colletotrichum gloeosporioides CGGC5_11066 N
FFUJ_09986 Fusarium fujikuroi FFUJ_09986 N
FGRRES_16102 Fusarium graminearum FGRRES_16102 N
FOXG_13711 Fusarium oxysporum FOXG_13711 N
FPSE_03733 Fusarium pseudograminearum FPSE_03733 N
NechaG71446 Fusarium solani NechaG71446 N