Scas_Contig707.46 (Saccharomyces castellii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Scas_Contig707.46 T144970_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMR3
M00042_2.00 		Saccharomyces cerevisiae
HGTARATCN
NGATYTACD		 PBM
Badis et al.(2008)
YPR013C_2104 		0.792 0.913
CMR3
M01539_2.00 		Saccharomyces cerevisiae
NGATYDRCVN
NBGYHRATCN		 PBM
Zhu et al.(2009)
Ypr013c 		0.792 0.913
CMR3
M07471_2.00 		Saccharomyces cerevisiae
NGATYKRCR
YGYMRATCN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0434.1 		0.792 0.913
CMR3
M08545_2.00 		Saccharomyces cerevisiae
NNNRVYGTARATCMYDNNNN
NNNNHRKGATYTACRBYNNN		 Misc
DeBoer et al.(2011)
YPR013C_859 		0.792 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig707.46 C2H2 ZF 270 292
Scas_Contig707.46 C2H2 ZF 298 322

Links

Other C2H2 ZF family TFs
Other Saccharomyces castellii TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ECANG7_01169 Echinococcus canadensis ECANG7_01169 N
EmuJ_000436300 Echinococcus multilocularis EmuJ_000436300 N
TASK_0000053901 Taenia asiatica TASK_0000053901 N