20252_YOR113W (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 20252_YOR113W T145944_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF1
M00039_2.00 		Saccharomyces cerevisiae
YNNHNNNNNN
NNNNNNDNNR		 PBM
Badis et al.(2008)
AZF1_2102 		0.827 1.000
AZF1
M07469_2.00 		Saccharomyces cerevisiae
NTTCTTTTN
NAAAAGAAN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0277.1 		0.827 1.000
AZF1
M08542_2.00 		Saccharomyces cerevisiae
BTTCTTTTB
VAAAAGAAV		 Misc
DeBoer et al.(2011)
YOR113W_499 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
20252_YOR113W C2H2 ZF 583 605
20252_YOR113W C2H2 ZF 611 633
20252_YOR113W C2H2 ZF 639 661
20252_YOR113W C2H2 ZF 667 692

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AZF1 Saccharomyces cerevisiae YOR113W D 0.827
XP_002493607.1 Pichia pastoris XP_002493607.1 I 0.774
BN7_628 Wickerhamomyces ciferrii BN7_628 I 0.757
SAKL0E10714g Lachancea kluyveri SAKL0E10714g I 0.772
Kwal_17888 Kluyveromyces waltii Kwal_17888 I 0.759
KLTH0E09724g Kluyveromyces thermotolerans KLTH0E09724g I 0.759
22792_YOR113W Saccharomyces bayanus 22792_YOR113W I 0.815
20760_YOR113W Saccharomyces paradoxus 20760_YOR113W I 0.827
ZYRO0B16148g Zygosaccharomyces rouxii ZYRO0B16148g I 0.774
ZBAI_09160 Zygosaccharomyces bailii ZBAI_09160 I 0.780
ZBAI_02902 Zygosaccharomyces bailii ZBAI_02902 I 0.780
TPHA_0B02910 Tetrapisispora phaffii TPHA_0B02910 I 0.760
TDEL_0B05250 Torulaspora delbrueckii TDEL_0B05250 I 0.765
SU7_3257 Saccharomyces arboricola SU7_3257 I 0.827
PAS_chr4_0202 Komagataella pastoris PAS_chr4_0202 I 0.774
NDAI_0B04290 Naumovozyma dairenensis NDAI_0B04290 I 0.770
Kpol_1072p58 Vanderwaltozyma polyspora Kpol_1072p58 I 0.784
KLTH0E09724g Lachancea thermotolerans KLTH0E09724g I 0.759
KAFR_0C04550 Kazachstania africana KAFR_0C04550 I 0.772
Ecym_5424 Eremothecium cymbalariae Ecym_5424 I 0.762