PAS_chr4_0202 (Komagataella pastoris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PAS_chr4_0202 T125398_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF1
M00039_2.00 		Saccharomyces cerevisiae
YNNHNNNNNN
NNNNNNDNNR		 PBM
Badis et al.(2008)
AZF1_2102 		0.774 0.783
AZF1
M07469_2.00 		Saccharomyces cerevisiae
NTTCTTTTN
NAAAAGAAN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0277.1 		0.774 0.783
AZF1
M08542_2.00 		Saccharomyces cerevisiae
BTTCTTTTB
VAAAAGAAV		 Misc
DeBoer et al.(2011)
YOR113W_499 		0.774 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAY71428 C2H2 ZF 590 612
CAY71428 C2H2 ZF 618 640
CAY71428 C2H2 ZF 646 668
CAY71428 C2H2 ZF 674 699

Links

Other C2H2 ZF family TFs
Other Komagataella pastoris TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
XP_002493607.1 Pichia pastoris XP_002493607.1 I 0.827
22792_YOR113W Saccharomyces bayanus 22792_YOR113W I 0.786
SU7_3257 Saccharomyces arboricola SU7_3257 I 0.774
AZF1 Saccharomyces cerevisiae YOR113W D 0.774
20252_YOR113W Saccharomyces mikatae 20252_YOR113W I 0.774
20760_YOR113W Saccharomyces paradoxus 20760_YOR113W I 0.774
ZBAI_02902 Zygosaccharomyces bailii ZBAI_02902 I 0.771
ZBAI_09160 Zygosaccharomyces bailii ZBAI_09160 I 0.771
Ecym_5424 Eremothecium cymbalariae Ecym_5424 I 0.770
ZYRO0B16148g Zygosaccharomyces rouxii ZYRO0B16148g I 0.770
KLTH0E09724g Lachancea thermotolerans KLTH0E09724g I 0.766
Kpol_1072p58 Vanderwaltozyma polyspora Kpol_1072p58 I 0.766
KLTH0E09724g Kluyveromyces thermotolerans KLTH0E09724g I 0.766
Kwal_17888 Kluyveromyces waltii Kwal_17888 I 0.766
KAFR_0C04550 Kazachstania africana KAFR_0C04550 I 0.760
KUCA_T00002085001 Kuraishia capsulata KUCA_T00002085001 N 0.759
TDEL_0B05250 Torulaspora delbrueckii TDEL_0B05250 I 0.759
AACERI_AaceriACR264W Saccharomycetaceae sp ashbya aceri AACERI_AaceriACR264W N 0.758
AGOS_ACR264W Ashbya gossypii AGOS_ACR264W N 0.758
HPODL_02523 Ogataea parapolymorpha HPODL_02523 N 0.757
NDAI_0B04290 Naumovozyma dairenensis NDAI_0B04290 I 0.756