Minc12570 (Meloidogyne incognita)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Minc12570 T146452_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
che-1
M00609_2.00 		Caenorhabditis elegans
NGAARCCHNN
NNDGGYTTCN		 PBM
Narasimhan et al.(2015)
pTH10015 		0.770 0.831
che-1
M08451_2.00 		Caenorhabditis elegans
SGYTTC
GAARCS		 COMPILED
Mathelier et al.(2014)
MA0260.1 		0.770 0.831
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Minc12570 C2H2 ZF 390 409
Minc12570 C2H2 ZF 415 437
Minc12570 C2H2 ZF 443 465
Minc12570 C2H2 ZF 471 493

Links

Other C2H2 ZF family TFs
Other Meloidogyne incognita TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
che-1 Caenorhabditis elegans WBGene00000483 D 0.770
CBG12674 Caenorhabditis briggsae CBG12674 I 0.770
CBN30944 Caenorhabditis brenneri CBN30944 I 0.770
CRE23561 Caenorhabditis remanei CRE23561 I 0.770
HPLM_0001518701 Haemonchus placei HPLM_0001518701 I 0.773
maker-nMf.1.1.scaf05782-augustus-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf05782-augustus-gene-0.8 I 0.825
NBR_0000131901 Nippostrongylus brasiliensis NBR_0000131901 I 0.761
NECAME_14596 Necator americanus NECAME_14596 I 0.760
scaffold142-EXSNAP2012.10 Pristionchus exspectatus scaffold142-EXSNAP2012.10 I 0.784
TCNE_0000019201 Toxocara canis TCNE_0000019201 I 0.798
ACOC_0000430401 Angiostrongylus costaricensis ACOC_0000430401 N 0.778