CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1358061g001
(
Phoenix dactylifera
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PDK_20s1358061g001
T146561_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1358061g001
C2H2 ZF
500
523
YTCDIEGCSMSFSTKQDLTLHKRD
PDK_20s1358061g001
C2H2 ZF
524
547
ICPVKGCGKKFFSHKYLVQHRKVH
Links
Other
C2H2 ZF
family TFs
Other
Phoenix dactylifera
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA020123
Oryza indica
BGIOSGA020123
N
LPERR05G17730
Leersia perrieri
LPERR05G17730
N
MLOC_41071
Hordeum vulgare
MLOC_41071
N
OBART05G21830
Oryza barthii
OBART05G21830
N
OGLUM05G23020
Oryza glumaepatula
OGLUM05G23020
N
OMERI05G19700
Oryza meridionalis
OMERI05G19700
N
OPUNC05G19420
Oryza punctata
OPUNC05G19420
N
ORGLA05G0190100
Oryza glaberrima
ORGLA05G0190100
N
ORUFI05G23090
Oryza rufipogon
ORUFI05G23090
N
OS05G0500600
Oryza sativa
OS05G0500600
N
Sb09g024690
Sorghum bicolor
Sb09g024690
N
Si022117m.g
Setaria italica
Si022117m.g
N
Pavir.Ca01302
Panicum virgatum
Pavir.Ca01302
N
Pavir.J33892
Panicum virgatum
Pavir.J33892
N