CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA05G0190100
(
Oryza glaberrima
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ORGLA05G0190100
T200960_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA05G0190100.1
GRAS
36
423
IQQLLLHCAAALESNDVTLAQQAMWVLNNIASSQGDPSQRLTSWLLRALVARACRLCAAAPAGAAVEFLERGRAPPWGRAMSVTELADYVDLTPWHRFGFTASNAAILRAVAGASAVHVVDLSVTHCMQWPTLIDVLSKRPGGAPAIRITVPSVRPAVPPLLAVSSSELGARLAIFAKSKGVQLEFNVVESATTTSPKKTSTTLCQELASVLSDPPSLGLRDGEAVVVNCQSWLRHVAPDTRDLFLDTVRALNPCLVTVTDEDADLGSPSLASRMAGCFDFHWILLDALDMSAPKDSPRRLEQEAAVGRKIESVIGEEDGAERSEPGARLAERMSRKGFAGVVFDEEAAAEVRRLLSEHATGWGVKREDDMLVLTWKGHAAVFTGAWT
Links
Other
GRAS
family TFs
Other
Oryza glaberrima
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI05G23090
Oryza rufipogon
ORUFI05G23090
N
1.000
OS05G0500600
Oryza sativa
OS05G0500600
N
0.997
BGIOSGA020123
Oryza indica
BGIOSGA020123
N
0.995
OGLUM05G23020
Oryza glumaepatula
OGLUM05G23020
N
0.995
OMERI05G19700
Oryza meridionalis
OMERI05G19700
N
0.983
OPUNC05G19420
Oryza punctata
OPUNC05G19420
N
0.931
OB05G29380
Oryza brachyantha
OB05G29380
N
0.862
Sb09g024690
Sorghum bicolor
Sb09g024690
N
0.813
Pavir.J33892
Panicum virgatum
Pavir.J33892
N
0.808
GRMZM2G313078
Zea mays
GRMZM2G313078
N
0.797
MLOC_41071
Hordeum vulgare
MLOC_41071
N
0.789
LPERR05G17730
Leersia perrieri
LPERR05G17730
N
0.783
OLONG_006513
Oryza longistaminata
OLONG_006513
N
0.783
Pavir.Ca01302
Panicum virgatum
Pavir.Ca01302
N
0.783
Si022117m.g
Setaria italica
Si022117m.g
N
0.777
OBART05G21830
Oryza barthii
OBART05G21830
N
0.762