CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB05G29380
(
Oryza brachyantha
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OB05G29380
T200604_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB05G29380.1
GRAS
38
429
TQQLLLHCAAALESNDVTLAQQAMWVLNNIASSQGDPNQRLTSWLLRALVARAWRRLCAPAGASVACLESGAPAPPRGRGRAMSVTELADYVDLTPWHRFGFTASNAAILRAVAGRAAVHVVDLSVTHCMQWPTLIDILSKRPGGAPALRITVPSVRPAVPPLLAVSSEELGLRLANFATSRGVQLEFNVVESAATAATSPKKKKQPTPCQELASVLSDPPSLGLRDGEALIVNCQSWLRHVAPDSRDFFLDTVRTLNPCLVTVTDEDADLDSPSLASRMAGCFNFHWILLDALDMSAPRDSPRRLEQEAAIGRKIESVISEDGGERSESGARLAERMRQREFASVGFDEEAAAEVRRLLGEHATGWGVKREDDMLVLTWKGHGAVFTSAWV
Links
Other
GRAS
family TFs
Other
Oryza brachyantha
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC05G19420
Oryza punctata
OPUNC05G19420
N
0.887
ORGLA05G0190100
Oryza glaberrima
ORGLA05G0190100
N
0.862
ORUFI05G23090
Oryza rufipogon
ORUFI05G23090
N
0.862
BGIOSGA020123
Oryza indica
BGIOSGA020123
N
0.860
OS05G0500600
Oryza sativa
OS05G0500600
N
0.860
OGLUM05G23020
Oryza glumaepatula
OGLUM05G23020
N
0.857
OMERI05G19700
Oryza meridionalis
OMERI05G19700
N
0.846
Sb09g024690
Sorghum bicolor
Sb09g024690
N
0.810
GRMZM2G313078
Zea mays
GRMZM2G313078
N
0.807
LPERR05G17730
Leersia perrieri
LPERR05G17730
N
0.802
MLOC_41071
Hordeum vulgare
MLOC_41071
N
0.802
Pavir.J33892
Panicum virgatum
Pavir.J33892
N
0.802
Si022117m.g
Setaria italica
Si022117m.g
N
0.785
Pavir.Ca01302
Panicum virgatum
Pavir.Ca01302
N
0.785
BRADI2G20760
Brachypodium distachyon
BRADI2G20760
N
0.714