ACUA018690 (Anopheles culicifacies)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ACUA018690 T147994_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.768 0.832
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.768 0.832
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.768 0.832
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACUA018690-PA C2H2 ZF 381 403
ACUA018690-PA C2H2 ZF 413 434
ACUA018690-PA C2H2 ZF 438 460
ACUA018690-PA C2H2 ZF 466 488
ACUA018690-PA C2H2 ZF 494 515

Links

Other C2H2 ZF family TFs
Other Anopheles culicifacies TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene17117-v1.0-hybrid Fragaria vesca gene17117-v1.0-hybrid N 0.000
mgf025666m Mimulus guttatus mgf025666m N 0.000
Aquca_007_00960 Aquilegia coerulea Aquca_007_00960 N 0.000
Bostr.25542s0007 Boechera stricta Bostr.25542s0007 N 0.000
Cagra.1383s0007 Capsella grandiflora Cagra.1383s0007 N 0.000
Carubv10007256m.g Capsella rubella Carubv10007256m.g N 0.000
Ciclev10027888m.g Citrus clementina Ciclev10027888m.g N 0.000
Eucgr.I01547 Eucalyptus grandis Eucgr.I01547 N 0.000
evm.TU.supercontig_60.4 Carica papaya evm.TU.supercontig_60.4 N 0.000
gene12983-v1.0-hybrid Fragaria vesca gene12983-v1.0-hybrid N 0.000
mgf015959m Mimulus guttatus mgf015959m N 0.000
Gorai.013G065300 Gossypium raimondii Gorai.013G065300 N 0.000
MDP0000200105 Malus domestica MDP0000200105 N 0.000
MDP0000261311 Malus domestica MDP0000261311 N 0.000
MDP0000308670 Malus domestica MDP0000308670 N 0.000
SapurV1A.0047s0510 Salix purpurea SapurV1A.0047s0510 N 0.000
SapurV1A.0216s0420 Salix purpurea SapurV1A.0216s0420 N 0.000
SapurV1A.2929s0020 Salix purpurea SapurV1A.2929s0020 N 0.000
Thhalv10024456m.g Eutrema salsugineum Thhalv10024456m.g N 0.000
PK08522.1 Cannabis sativa PK08522.1 N 0.000
TCM_007609 Theobroma cacao TCM_007609 N 0.000
Bo3g034290 Brassica oleracea Bo3g034290 N 0.000
GLYMA01G00321 Glycine max GLYMA01G00321 N 0.000
GLYMA11G09400 Glycine max GLYMA11G09400 N 0.000
GLYMA14G00240 Glycine max GLYMA14G00240 N 0.000
POPTR_0004s21880 Populus trichocarpa POPTR_0004s21880 N 0.000
POPTR_0009s17110 Populus trichocarpa POPTR_0009s17110 N 0.000
PRUPE_ppa001597mg Prunus persica PRUPE_ppa001597mg N 0.000
PRUPE_ppa001606mg Prunus persica PRUPE_ppa001606mg N 0.000
Solyc01g112320.2 Solanum lycopersicum Solyc01g112320.2 N 0.000
FRS5 Arabidopsis thaliana AT4G38180 N 0.000
FRS5 Vitis vinifera VIT_03s0038g04140 N 0.000
VIT_04s0044g01920 Vitis vinifera VIT_04s0044g01920 N 0.000
Cla015971 Citrullus lanatus Cla015971 N 0.000
Pm020704 Prunus mume Pm020704 N 0.000
Pm026968 Prunus mume Pm026968 N 0.000
cassava23399.valid.m1 Manihot esculenta cassava23399.valid.m1 N 0.000
cassava9536.m1 Manihot esculenta cassava9536.m1 N 0.000
Cucsa.099970 Cucumis sativus Cucsa.099970 N 0.000